RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 FNBP1Q96RU3 617 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 TMEM117Q9H0C3 514 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 GANQ9H2C0 597 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 STX10O60499 249 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 CTSHP09668 335 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 CRYBB1P53674 252 aaPredicted RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 POLR2FP61218 127 aaKnown RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 OSTNP61366 133 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 ZBED6P86452 979 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 CACNA2D4Q7Z3S7 1137 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 RSPH3Q86UC2 560 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 BRSK2Q8IWQ3 736 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 ZNF397Q8NF99 534 aaPredicted RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 FAM84AQ96KN4 292 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 NLRC4Q9NPP4 1024 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 PLCB1Q9NQ66 1216 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 TRMT13Q9NUP7 481 aaKnown RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 CEP72Q9P209 647 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 CPSF3Q9UKF6 684 aaKnown RBP16.03■□□□□ 0.16
CIT-219ENST00000612548 CDY2AQ9Y6F7 541 aa16.03■□□□□ 0.16
CIT-219ENST00000612548 KBTBD13C9JR72 458 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 M0QZ92 97 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 ENPEPQ07075 957 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 CETN1Q12798 172 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 DPY19L2P1Q6NXN4 242 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 TRIM65Q6PJ69 517 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 OR8K1Q8NGG5 319 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 CELF4Q9BZC1 486 aaKnown RBP16.02■□□□□ 0.15
CIT-219ENST00000612548 INTS2Q9H0H0 1204 aaKnown RBP16.02■□□□□ 0.15
CIT-219ENST00000612548 TMEM8AQ9HCN3 771 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 SIX2Q9NPC8 291 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 STARD7Q9NQZ5 370 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 NOD1Q9Y239 953 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 TRPV2Q9Y5S1 764 aa16.02■□□□□ 0.15
CIT-219ENST00000612548 A0A1B0GUA9 196 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 P4HA2O15460 535 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 MCF2P10911 925 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 CCL5P13501 91 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 TNNI1P19237 187 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 GTF2H1P32780 548 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 NCBP1Q09161 790 aaKnown RBP16.01■□□□□ 0.15
CIT-219ENST00000612548 EPC2Q52LR7 807 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 KLHDC7AQ5VTJ3 777 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 KRT39Q6A163 491 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 RRAGAQ7L523 313 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 TMEM192Q8IY95 271 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 ZNF710Q8N1W2 664 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 C17orf53Q8N3J3 647 aaPredicted RBP16.01■□□□□ 0.15
CIT-219ENST00000612548 BAP1Q92560 729 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 DNAJC7Q99615 494 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 ADPGKQ9BRR6 497 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 RNF208Q9H0X6 261 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 FHOD1Q9Y613 1164 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 PTPRJQ12913 1337 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 ANK1P16157 1881 aa16.01■□□□□ 0.15
CIT-219ENST00000612548 LRRC53A6NM62 1247 aa16■□□□□ 0.15
CIT-219ENST00000612548 HSPA8P11142 646 aaKnown RBP16■□□□□ 0.15
CIT-219ENST00000612548 UCHL3P15374 230 aa16■□□□□ 0.15
CIT-219ENST00000612548 HOXA11P31270 313 aaPredicted RBP16■□□□□ 0.15
CIT-219ENST00000612548 THPOP40225 353 aa16■□□□□ 0.15
CIT-219ENST00000612548 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
CIT-219ENST00000612548 PCBP1Q15365 356 aaKnown RBP eCLIP16■□□□□ 0.151e-7■■□□□ 13.3
CIT-219ENST00000612548 ENOX2Q16206 610 aaKnown RBP16■□□□□ 0.15
CIT-219ENST00000612548 TSR1Q2NL82 804 aaKnown RBP16■□□□□ 0.15
CIT-219ENST00000612548 PDXDC1Q6P996 788 aa16■□□□□ 0.15
CIT-219ENST00000612548 GJB7Q6PEY0 223 aa16■□□□□ 0.15
CIT-219ENST00000612548 SV2AQ7L0J3 742 aa16■□□□□ 0.15
CIT-219ENST00000612548 GPIHBP1Q8IV16 184 aa16■□□□□ 0.15
CIT-219ENST00000612548 CGRRF1Q99675 332 aa16■□□□□ 0.15
CIT-219ENST00000612548 EDEM3Q9BZQ6 932 aa16■□□□□ 0.15
CIT-219ENST00000612548 PHF24Q9UPV7 400 aa16■□□□□ 0.15
CIT-219ENST00000612548 PIN4Q9Y237 131 aaKnown RBP16■□□□□ 0.15
CIT-219ENST00000612548 A0A0U1RQG5 324 aaPredicted RBP16■□□□□ 0.15
CIT-219ENST00000612548 DNM1LO00429 736 aa16■□□□□ 0.15
CIT-219ENST00000612548 LRRN2O75325 713 aa16■□□□□ 0.15
CIT-219ENST00000612548 NPTXRO95502 500 aa16■□□□□ 0.15
CIT-219ENST00000612548 STAG3L1P0CL83 205 aa16■□□□□ 0.15
CIT-219ENST00000612548 CXCL8P10145 99 aa16■□□□□ 0.15
CIT-219ENST00000612548 CLDN10P78369 228 aa16■□□□□ 0.15
CIT-219ENST00000612548 NOTUMQ6P988 496 aa16■□□□□ 0.15
CIT-219ENST00000612548 EHBP1Q8NDI1 1231 aa16■□□□□ 0.15
CIT-219ENST00000612548 LMO3Q8TAP4 145 aa16■□□□□ 0.15
CIT-219ENST00000612548 ZNF516Q92618 1163 aa16■□□□□ 0.15
CIT-219ENST00000612548 RPF1Q9H9Y2 349 aaKnown RBP16■□□□□ 0.15
CIT-219ENST00000612548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■■■■ 137.2
CIT-219ENST00000612548 AJAP1Q9UKB5 411 aaPredicted RBP16■□□□□ 0.15
CIT-219ENST00000612548 NOC2LQ9Y3T9 749 aaKnown RBP16■□□□□ 0.15
CIT-219ENST00000612548 SOWAHDA6NJG2 315 aa15.99■□□□□ 0.15
CIT-219ENST00000612548 PMM2O15305 246 aa15.99■□□□□ 0.15
CIT-219ENST00000612548 ARHGAP6O43182 974 aa15.99■□□□□ 0.15
CIT-219ENST00000612548 CHRNA1P02708 482 aa15.99■□□□□ 0.15
CIT-219ENST00000612548 RPLP2P05387 115 aaKnown RBP15.99■□□□□ 0.15
CIT-219ENST00000612548 FECHP22830 423 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms