RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZSWIM1Q9BR11 485 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 CARD9Q9H257 536 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 TMEM8AQ9HCN3 771 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 CENPFP49454 3210 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 GJB6O95452 261 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 IVLP07476 585 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 NR1D1P20393 614 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 PTENP60484 403 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 DRP2Q13474 957 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 CUL1Q13616 776 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 TREML2Q5T2D2 321 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 TMC3Q7Z5M5 1100 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 CCDC26Q8TAB7 109 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 ASAP3Q8TDY4 903 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 ATP6V1G3Q96LB4 118 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 NT5C1BQ96P26 610 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 FAM118BQ9BPY3 351 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 ANKFY1Q9P2R3 1169 aa15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 UTP11Q9Y3A2 253 aaKnown RBP15.14■□□□□ 0.01
PCDHGA3-202ENST00000612467 PHIPQ8WWQ0 1821 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 POLR2AP24928 1970 aaKnown RBP15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 SMIM23A6NLE4 172 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 SPDYE16A6NNV3 312 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 TULP2O00295 520 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 SPOPO43791 374 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 GRIN3BO60391 1043 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 SHBGP04278 402 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 TMOD1P28289 359 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 NF2P35240 595 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 PEX5P50542 639 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 HIRAP54198 1017 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 MFAP3P55082 362 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 JAMLQ86YT9 394 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 RHOT2Q8IXI1 618 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 TMEM130Q8N3G9 435 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 GPRASP2Q96D09 838 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 SLITRK6Q9H5Y7 841 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 EXOC7Q9UPT5 735 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 UMODL1Q5DID0 1318 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 MYH9P35579 1960 aaKnown RBP15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 P4HA2O15460 535 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 ABHD15Q6UXT9 468 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 OTUD6AQ7L8S5 288 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 GPD1LQ8N335 351 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 FBXO25Q8TCJ0 367 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 MFSD14AQ96MC6 490 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 HERPUD2Q9BSE4 406 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 TMBIM4Q9HC24 238 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 PDLIM7Q9NR12 457 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 DOCK1Q14185 1865 aa15.13■□□□□ 0.01
PCDHGA3-202ENST00000612467 LRRIQ4A6NIV6 560 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 PSAPP07602 524 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 TNNI1P19237 187 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 RFX1P22670 979 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 PDE6CP51160 858 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 TGFB2P61812 414 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 SNX1Q13596 522 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 ATP6V0A1Q93050 837 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 MAGOHBQ96A72 148 aaKnown RBP15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 ZBTB10Q96DT7 871 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 CNOT8Q9UFF9 292 aaKnown RBP15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 ATP8B3O60423 1300 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 ARID2Q68CP9 1835 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 LIG4P49917 911 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 GPC3P51654 580 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 POLGP54098 1239 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 CDR2Q01850 454 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 SF3A3Q12874 501 aaKnown RBP eCLIP15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 EMC2Q15006 297 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 NLGN2Q8NFZ4 835 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 KIFAP3Q92845 792 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 TEX13BQ9BXU2 312 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 FEZ2Q9UHY8 353 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 DAAM1Q9Y4D1 1078 aa15.12■□□□□ 0.01
PCDHGA3-202ENST00000612467 CLDN3O15551 220 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 BIRC3Q13489 604 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 TDRD10Q5VZ19 366 aaKnown RBP15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 ZDHHC24Q6UX98 284 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 CATSPERGQ6ZRH7 1159 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 C1orf54Q8WWF1 131 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 ATG4AQ8WYN0 398 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 KLRG1Q96E93 195 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 FBXL18Q96ME1 805 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 IWS1Q96ST2 819 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 ERP44Q9BS26 406 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 ACAD9Q9H845 621 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 ATP6V0A4Q9HBG4 840 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 MAP3K20Q9NYL2 800 aaKnown RBP15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 LCTP09848 1927 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 SSC5DA1L4H1 1573 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 DGAT1O75907 488 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 RARAP10276 462 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 RRM1P23921 792 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 PTGIRP43119 386 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 RPL21P46778 160 aaKnown RBP15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 SKOR1P84550 965 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 DCAF15Q66K64 600 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms