RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 FAM212AQ96EL1 285 aa19.06■□□□□ 0.64
SREK1-216ENST00000612404 PAWRQ96IZ0 340 aaKnown RBP19.06■□□□□ 0.64
SREK1-216ENST00000612404 FNBP1Q96RU3 617 aa19.06■□□□□ 0.64
SREK1-216ENST00000612404 CRACR2AQ9BSW2 395 aa19.06■□□□□ 0.64
SREK1-216ENST00000612404 TRIM6Q9C030 488 aaPredicted RBP19.06■□□□□ 0.64
SREK1-216ENST00000612404 PDE11AQ9HCR9 933 aa19.06■□□□□ 0.64
SREK1-216ENST00000612404 CPSF3Q9UKF6 684 aaKnown RBP19.06■□□□□ 0.64
SREK1-216ENST00000612404 LRRIQ3A6PVS8 624 aaPredicted RBP19.05■□□□□ 0.64
SREK1-216ENST00000612404 CD4P01730 458 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 COL6A1P12109 1028 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 GCLMP48507 274 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 FMO5P49326 533 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 KLK7P49862 253 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 PSMD6Q15008 389 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 TMEM192Q8IY95 271 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 CAGE1Q8TC20 777 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 ERGIC2Q96RQ1 377 aa19.05■□□□□ 0.64
SREK1-216ENST00000612404 EIF2AQ9BY44 585 aaKnown RBP19.05■□□□□ 0.64
SREK1-216ENST00000612404 GPR182O15218 404 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 STAG3L1P0CL83 205 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 CD52P31358 61 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 PAK2Q13177 524 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 LPIN1Q14693 890 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 TRIM60Q495X7 471 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 C1orf220Q5T0J3 134 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 BRSK2Q8IWQ3 736 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 OSBPL7Q9BZF2 842 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 C11orf49Q9H6J7 331 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 AGO3Q9H9G7 860 aaKnown RBP19.04■□□□□ 0.64
SREK1-216ENST00000612404 TOPORSQ9NS56 1045 aaPredicted RBP19.04■□□□□ 0.64
SREK1-216ENST00000612404 DCDC2CA8MYV0 355 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 STX10O60499 249 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 CLTAP09496 248 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 TNNI1P19237 187 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 WNT7BP56706 349 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 PPP3CAQ08209 521 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 BFSP2Q13515 415 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 CBWD6Q4V339 395 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 CBWD3Q5JTY5 395 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 CBWD5Q5RIA9 395 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 TWF2Q6IBS0 349 aaKnown RBP19.04■□□□□ 0.64
SREK1-216ENST00000612404 RPF1Q9H9Y2 349 aaKnown RBP19.04■□□□□ 0.64
SREK1-216ENST00000612404 IMPACTQ9P2X3 320 aa19.04■□□□□ 0.64
SREK1-216ENST00000612404 MYL7Q01449 175 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 TLE2Q04725 743 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 ENOX2Q16206 610 aaKnown RBP19.03■□□□□ 0.64
SREK1-216ENST00000612404 KYAT1Q16773 422 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 LMBRD2Q68DH5 695 aaPredicted RBP19.03■□□□□ 0.64
SREK1-216ENST00000612404 ANKRD33Q7Z3H0 272 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 PPFIBP1Q86W92 1011 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 PADI3Q9ULW8 664 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 ATP11BQ9Y2G3 1177 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.03■□□□□ 0.641e-6■■■□□ 16.7
SREK1-216ENST00000612404 ITIH6Q6UXX5 1313 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 CXCL8P10145 99 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 GBP6Q6ZN66 633 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 LRRC8DQ7L1W4 858 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 CCDC186Q7Z3E2 898 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 CPLX3Q8WVH0 158 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 FAM207AQ9NSI2 230 aaPredicted RBP19.03■□□□□ 0.64
SREK1-216ENST00000612404 GCNT4Q9P109 453 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 SIK3Q9Y2K2 1263 aa19.03■□□□□ 0.64
SREK1-216ENST00000612404 SELPP16109 830 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 TRIM21P19474 475 aaKnown RBP19.02■□□□□ 0.64
SREK1-216ENST00000612404 MXI1P50539 228 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 EXOC3L4Q17RC7 722 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 TRAF7Q6Q0C0 670 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 USP38Q8NB14 1042 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 CCDC51Q96ER9 411 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 ACAP3Q96P50 834 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 CCDC94Q9BW85 323 aaPredicted RBP19.02■□□□□ 0.64
SREK1-216ENST00000612404 ERVK-5Q9HDB9 667 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 HES2Q9Y543 173 aa19.02■□□□□ 0.64
SREK1-216ENST00000612404 N4BP1O75113 896 aaKnown RBP19.01■□□□□ 0.63
SREK1-216ENST00000612404 ZSCAN20P17040 1043 aaPredicted RBP19.01■□□□□ 0.63
SREK1-216ENST00000612404 GRM5P41594 1212 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 MCCD1P59942 119 aaPredicted RBP19.01■□□□□ 0.63
SREK1-216ENST00000612404 ENPEPQ07075 957 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 RBL2Q08999 1139 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 KCNMA1Q12791 1236 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 CETN1Q12798 172 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 NECAB2Q7Z6G3 386 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 FAM84AQ96KN4 292 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 APOL6Q9BWW8 343 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 LSM14BQ9BX40 385 aaKnown RBP19.01■□□□□ 0.63
SREK1-216ENST00000612404 TMEM117Q9H0C3 514 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 GTPBP10A4D1E9 387 aaKnown RBP19.01■□□□□ 0.63
SREK1-216ENST00000612404 TPM1P09493 284 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 GTF2H1P32780 548 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 FAAP100Q0VG06 881 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 TBX2Q13207 712 aaPredicted RBP19.01■□□□□ 0.63
SREK1-216ENST00000612404 MBTPS1Q14703 1052 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 UBXN11Q5T124 520 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 C1orf53Q5VUE5 145 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 NEK11Q8NG66 645 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 TOX2Q96NM4 488 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 CGRRF1Q99675 332 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 NXF3Q9H4D5 531 aaKnown RBP19.01■□□□□ 0.63
SREK1-216ENST00000612404 TMEM8AQ9HCN3 771 aa19.01■□□□□ 0.63
SREK1-216ENST00000612404 CHST12Q9NRB3 414 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms