RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAM228AQ86W67 206 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 POMGNT1Q8WZA1 660 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 SEC14L1Q92503 715 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 TAOK3Q9H2K8 898 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 MRPL11Q9Y3B7 192 aaKnown RBP15.05■□□□□ 0
COL6A1-207ENST00000612273 TELO2Q9Y4R8 837 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 AFF2P51816 1311 aa15.05■□□□□ 0
COL6A1-207ENST00000612273 CYP11B1P15538 503 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 YWHABP31946 246 aaKnown RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 PEX5P50542 639 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 PDE6CP51160 858 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 RWDD2BP57060 319 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 CCDC63Q8NA47 563 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 ATXN2LQ8WWM7 1075 aaKnown RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 MASTLQ96GX5 879 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 SGSM3Q96HU1 749 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 R3HDM2Q9Y2K5 976 aaKnown RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 PASKQ96RG2 1323 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 DENND3A2RUS2 1198 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 THAP12O43422 761 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 SEZ6Q53EL9 994 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 GSTA5Q7RTV2 222 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 SPIRE2Q8WWL2 714 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 PRCCQ92733 491 aaPredicted RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 ZNF317Q96PQ6 595 aaPredicted RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 MYCBPQ99417 103 aaPredicted RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 LBHD1Q9BQE6 289 aaPredicted RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 TXLNGYQ9BZA5 131 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 CNOT10Q9H9A5 744 aaKnown RBP15.05■□□□□ -0
COL6A1-207ENST00000612273 SEL1LQ9UBV2 794 aa15.05■□□□□ -0
COL6A1-207ENST00000612273 MYH11P35749 1972 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 UBOX5O94941 541 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 CD58P19256 250 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 RRM1P23921 792 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 PSMC4P43686 418 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 ZNF131P52739 623 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 KCNJ2P63252 427 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 C6orf118Q5T5N4 469 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 EIF1ADQ8N9N8 165 aaKnown RBP15.04■□□□□ -0
COL6A1-207ENST00000612273 CHURC1Q8WUH1 139 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 N4BP2L2Q92802 583 aaPredicted RBP15.04■□□□□ -0
COL6A1-207ENST00000612273 MXRA8Q9BRK3 442 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 FAM213AQ9BRX8 229 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 ZNF341Q9BYN7 854 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 ODF2LQ9ULJ1 636 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 AGAP1Q9UPQ3 857 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 MIF4GDA9UHW6 222 aaKnown RBP15.04■□□□□ -0
COL6A1-207ENST00000612273 SPAG7O75391 227 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 CNGA1P29973 690 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 MTMR1Q13613 665 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 CYFIP1Q7L576 1253 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 PNMA3Q9UL41 463 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 HNRNPDLO14979 420 aaKnown RBP15.04■□□□□ -0
COL6A1-207ENST00000612273 CFHP08603 1231 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 VIL1P09327 827 aaKnown RBP15.04■□□□□ -0
COL6A1-207ENST00000612273 ADSSP30520 456 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 PDE6BP35913 854 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 MMP13P45452 471 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 ITGA8P53708 1063 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 ACCSLQ4AC99 568 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 C1orf131Q8NDD1 294 aaKnown RBP15.04■□□□□ -0
COL6A1-207ENST00000612273 TAAR1Q96RJ0 339 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 C11orf70Q9BRQ4 267 aa15.04■□□□□ -0
COL6A1-207ENST00000612273 ACTR5Q9H9F9 607 aaPredicted RBP15.04■□□□□ -0
COL6A1-207ENST00000612273 A8MUI8 341 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 PODXLO00592 558 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 P4HBP07237 508 aaKnown RBP15.03■□□□□ -0
COL6A1-207ENST00000612273 SCP2P22307 547 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 ANXA13P27216 316 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 QARSP47897 775 aaKnown RBP15.03■□□□□ -0
COL6A1-207ENST00000612273 ATP13A4Q4VNC1 1196 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 CYP4X1Q8N118 509 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 NLGN1Q8N2Q7 840 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 NOCTQ9UK39 431 aaKnown RBP15.03■□□□□ -0
COL6A1-207ENST00000612273 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.03■□□□□ -0
COL6A1-207ENST00000612273 BRAFP15056 766 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 MFAP3P55082 362 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 ADCY2Q08462 1091 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 SLC15A2Q16348 729 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 TRPM8Q7Z2W7 1104 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 NT5C1BQ96P26 610 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 CXorf56Q9H5V9 222 aa15.03■□□□□ -0
COL6A1-207ENST00000612273 POC1B-GALNT4F8VUJ3 575 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 H0YIN7 160 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 NUDT17P0C025 328 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 PLS3P13797 630 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 TNNI1P19237 187 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 MMP14P50281 582 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 MPP2Q14168 576 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 DLGAP5Q15398 846 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 CNGA2Q16280 664 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 ZNF394Q53GI3 561 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 NRAPQ86VF7 1730 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 TMX2Q9Y320 296 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 CTDP1Q9Y5B0 961 aaPredicted RBP15.02■□□□□ -0
COL6A1-207ENST00000612273 NHSQ6T4R5 1651 aa15.02■□□□□ -0
COL6A1-207ENST00000612273 YDJCA8MPS7 323 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 PIK3CDO00329 1044 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 RALAP11233 206 aa15.02□□□□□ -0.01
COL6A1-207ENST00000612273 KRT10P13645 584 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms