RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ARHGAP20Q9P2F6 1191 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 HDAC6Q9UBN7 1215 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 AJAP1Q9UKB5 411 aaPredicted RBP13.34□□□□□ -0.27
CBWD1-220ENST00000612045 TNFSF13BQ9Y275 285 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 CNTNAP2Q9UHC6 1331 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 OGTO15294 1046 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 TREHO43280 583 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 FKTNO75072 461 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 OFD1O75665 1012 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
CBWD1-220ENST00000612045 GNAT1P11488 350 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 CYLC1P35663 651 aaPredicted RBP13.34□□□□□ -0.27
CBWD1-220ENST00000612045 WNT7BP56706 349 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 JAM2P57087 298 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 ZNF200P98182 395 aaPredicted RBP13.34□□□□□ -0.27
CBWD1-220ENST00000612045 TMEM62Q0P6H9 643 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 PTPN14Q15678 1187 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 ZNF568Q3ZCX4 644 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 DNTTIP2Q5QJE6 756 aaKnown RBP13.34□□□□□ -0.27
CBWD1-220ENST00000612045 HGSNATQ68CP4 663 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 CXCL17Q6UXB2 119 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 SRGAP1Q7Z6B7 1085 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 ACRBPQ8NEB7 543 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 PXYLP1Q8TE99 480 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 CCDC42Q96M95 316 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 ADAMTS10Q9H324 1103 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 PDE11AQ9HCR9 933 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 SAGE1Q9NXZ1 904 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 COQ4Q9Y3A0 265 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 GOLGA6L9A6NEM1 432 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 LRRN2O75325 713 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 GPR32O75388 356 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 SERPING1P05155 500 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 TNFSF9P41273 254 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 SLC9C1Q4G0N8 1177 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 EEF1DP3Q658K8 133 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 PHLDB3Q6NSJ2 640 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 SV2AQ7L0J3 742 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
CBWD1-220ENST00000612045 BRSK2Q8IWQ3 736 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 KLHDC9Q8NEP7 349 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 TAS1R2Q8TE23 839 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
CBWD1-220ENST00000612045 ZNF516Q92618 1163 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 STK33Q9BYT3 514 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 DNAJC12Q9UKB3 198 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 SCN10AQ9Y5Y9 1956 aa13.33□□□□□ -0.28
CBWD1-220ENST00000612045 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 TNNT1P13805 278 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 TNNI1P19237 187 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 RFX1P22670 979 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 EIF4A3P38919 411 aaKnown RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 ARID5AQ03989 594 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 ASIC2Q16515 512 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 NBPF20Q3BBV1 942 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 LMBRD2Q68DH5 695 aaPredicted RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 FBXL13Q8NEE6 735 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 DNAJB3Q8WWF6 145 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 SEMA4DQ92854 862 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 CDT1Q9H211 546 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 CPSF3Q9UKF6 684 aaKnown RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 REXO2Q9Y3B8 237 aaKnown RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 PTPRJQ12913 1337 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 SSU72P8A0A1W2PR75 194 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 EIF3CLB5ME19 914 aaKnown RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 TSPAN1O60635 241 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 ARF4P18085 180 aaPredicted RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 IRF2BP2Q7Z5L9 587 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 CPB2Q96IY4 423 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 FAM84AQ96KN4 292 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 EIF3CQ99613 913 aaKnown RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 CGRRF1Q99675 332 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 GCOM2Q9BZD3 368 aaPredicted RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 DEF6Q9H4E7 631 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 PDZD7Q9H5P4 517 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 RAB20Q9NX57 234 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
CBWD1-220ENST00000612045 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
CBWD1-220ENST00000612045 F8VZ95 297 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 ERLIN2O94905 339 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
CBWD1-220ENST00000612045 ASGR1P07306 291 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 MCF2P10911 925 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
CBWD1-220ENST00000612045 STAT1P42224 750 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 KIF11P52732 1056 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 KRT83P78385 493 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 DRAP1Q14919 205 aaPredicted RBP13.31□□□□□ -0.28
CBWD1-220ENST00000612045 KCNA10Q16322 511 aa13.31□□□□□ -0.28
CBWD1-220ENST00000612045 ASTE1Q2TB18 679 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms