RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 XPNPEP1Q9NQW7 623 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 FBXO40Q9UH90 709 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 WDR81Q562E7 1941 aa11.23□□□□□ -0.61
PABPC1-224ENST00000610907 TTI1O43156 1089 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 DAPK3O43293 454 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 MYBL1P10243 752 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 HSD17B3P37058 310 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 PEX5P50542 639 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
PABPC1-224ENST00000610907 DR1Q01658 176 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 STRN3Q13033 797 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 BIRC3Q13489 604 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 PSMD6Q15008 389 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 TRADDQ15628 312 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 ANGEL2Q5VTE6 544 aaKnown RBP11.22□□□□□ -0.61
PABPC1-224ENST00000610907 DUPD1Q68J44 220 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 PPP1R2P3Q6NXS1 205 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 SLC47A2Q86VL8 602 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 CCDC60Q8IWA6 550 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-224ENST00000610907 TAS1R2Q8TE23 839 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 KAT5Q92993 513 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 CD101Q93033 1021 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 FAM129AQ9BZQ8 928 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 TSPYL1Q9H0U9 437 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 TMBIM4Q9HC24 238 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 SEPT9Q9UHD8 586 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-224ENST00000610907 PCYOX1Q9UHG3 505 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 MTUS1Q9ULD2 1270 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 PLAAQ9Y263 795 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 PPME1Q9Y570 386 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 PCDHA3Q9Y5H8 950 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-224ENST00000610907 COL11A1P12107 1806 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-224ENST00000610907 ARID2Q68CP9 1835 aa11.22□□□□□ -0.61
PABPC1-224ENST00000610907 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 EIF3HO15372 352 aaKnown RBP eCLIP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 PHF2O75151 1096 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 KRT14P02533 472 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 MYZAPP0CAP1 466 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 COMTP21964 271 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 CTNNA1P35221 906 aaKnown RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 RFC5P40937 340 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 NAMPTP43490 491 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 LIG4P49917 911 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 PTPROQ16827 1216 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 WDR44Q5JSH3 913 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 SEL1L2Q5TEA6 688 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 ZNF564Q8TBZ8 553 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 DDX1Q92499 740 aaKnown RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 ALG3Q92685 438 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 ZBTB9Q96C00 473 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 BICD1Q96G01 975 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 KIFC3Q9BVG8 833 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 NIFKQ9BYG3 293 aaKnown RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 FAM107BQ9H098 131 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 POLR3FQ9H1D9 316 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 PORCNQ9H237 461 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 DHX33Q9H6R0 707 aaKnown RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 AVENQ9NQS1 362 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-224ENST00000610907 ZNF302Q9NR11 478 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 C1orf112Q9NSG2 853 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 PARP2Q9UGN5 583 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 ADGRA3Q8IWK6 1321 aa11.21□□□□□ -0.61
PABPC1-224ENST00000610907 IGKV6D-21A0A0A0MT36 114 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 H0YGN5 161 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TULP2O00295 520 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 ZEB2O60315 1214 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 GRIN3BO60391 1043 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 PPFIA2O75334 1257 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 ZBTB7AO95365 584 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 OATP04181 439 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 MMEP08473 750 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 POLGP54098 1239 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 MESDQ14696 234 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 EMC2Q15006 297 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 CYP1B1Q16678 543 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 CLEC16AQ2KHT3 1053 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 ZACNQ401N2 412 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 CEP85LQ5SZL2 805 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 AGBL2Q5U5Z8 902 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TAS1R3Q7RTX0 852 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TRMT1LQ7Z2T5 733 aaKnown RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TMC3Q7Z5M5 1100 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 MAIP1Q8WWC4 291 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 ZNF653Q96CK0 615 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 FNBP1Q96RU3 617 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 POP1Q99575 1024 aaKnown RBP11.2□□□□□ -0.62
PABPC1-224ENST00000610907 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 NUP85Q9BW27 656 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 PLEKHA4Q9H4M7 779 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
PABPC1-224ENST00000610907 NRBP2Q9NSY0 501 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms