RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 SF3B1O75533 1304 aaKnown RBP eCLIP15.81■□□□□ 0.123e-6■■■■■ 137.9
PKNOX1-210ENST00000607049 FAM13AO94988 1023 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 SLC12A3P55017 1021 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 ELAVL2Q12926 359 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 KCNC3Q14003 757 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 DHX8Q14562 1220 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 HSP90AA2PQ14568 343 aaPredicted RBP15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 USP41Q3LFD5 358 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 NT5DC1Q5TFE4 455 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 GPBP1Q86WP2 473 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 DAW1Q8N136 415 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 VN1R2Q8NFZ6 395 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 BCL7CQ8WUZ0 217 aaPredicted RBP15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 ACO2Q99798 780 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 MIOSQ9NXC5 875 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 ADAM28Q9UKQ2 775 aa15.81■□□□□ 0.12
PKNOX1-210ENST00000607049 TTLL13PA6NNM8 815 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 PI4K2BG5E9Z4 385 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 DCXO43602 365 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 B4GALT3O60512 393 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 MCF2P10911 925 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 MTHFRP42898 656 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 MATR3P43243 847 aaKnown RBP eCLIP15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 RBM10P98175 930 aaKnown RBP15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 RESTQ13127 1097 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 TMEM31Q5JXX7 168 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 ATAT1Q5SQI0 421 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 EEF1DP3Q658K8 133 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 MPZL3Q6UWV2 235 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 GPR65Q8IYL9 337 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 MYCT1Q8N699 235 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 GSTCDQ8NEC7 633 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 BICD1Q96G01 975 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 RPGRIP1Q96KN7 1286 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 UROC1Q96N76 676 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 KLHL5Q96PQ7 755 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 CCSER1Q9C0I3 900 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 ADAM7Q9H2U9 754 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 ZHX3Q9H4I2 956 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 PARVGQ9HBI0 331 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 CD320Q9NPF0 282 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 SLC38A7Q9NVC3 462 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 MARCH5Q9NX47 278 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 NR2E1Q9Y466 385 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 SRPRBQ9Y5M8 271 aaKnown RBP15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 CLIC4Q9Y696 253 aa15.8■□□□□ 0.12
PKNOX1-210ENST00000607049 CLDN3O15551 220 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 TRAPPC3O43617 180 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 TOM1L1O75674 476 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 CNPP09543 421 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 PLCG1P19174 1290 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 MARCKSP29966 332 aaPredicted RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 GRM5P41594 1212 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 CEBPZQ03701 1054 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 MAPK7Q13164 816 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 KARSQ15046 597 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 FUT10Q6P4F1 479 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 PDXDC1Q6P996 788 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 SYCE2Q6PIF2 218 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 ZBTB33Q86T24 672 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 KRI1Q8N9T8 703 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 SUSD6Q92537 303 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 LARP4BQ92615 738 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 RAD54LQ92698 747 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 FBXL18Q96ME1 805 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 ZNF396Q96N95 335 aaPredicted RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 ACAP3Q96P50 834 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 TARS2Q9BW92 718 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 APOL5Q9BWW9 433 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 SFXN1Q9H9B4 322 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 MTMR6Q9Y217 621 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 USP20Q9Y2K6 914 aa15.79■□□□□ 0.12
PKNOX1-210ENST00000607049 CASTOR2A6NHX0 329 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 GLUD1P00367 558 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 DDIT3P35638 169 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 DSG1Q02413 1049 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 STK38Q15208 465 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 KYAT1Q16773 422 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 RRAGBQ5VZM2 374 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 CCDC73Q6ZRK6 1079 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 TMEM161BQ8NDZ6 487 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 DDX27Q96GQ7 796 aaKnown RBP15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 REEP2Q9BRK0 252 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 VN1R3Q9BXE9 311 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 CDT1Q9H211 546 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 S1PR5Q9H228 398 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 EPHX3Q9H6B9 360 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 ANKFY1Q9P2R3 1169 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 STK17AQ9UEE5 414 aa15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.78■□□□□ 0.12
PKNOX1-210ENST00000607049 PTGESO14684 152 aa15.77■□□□□ 0.12
PKNOX1-210ENST00000607049 C1RP00736 705 aa15.77■□□□□ 0.12
PKNOX1-210ENST00000607049 MAPTP10636 758 aaKnown RBP15.77■□□□□ 0.12
PKNOX1-210ENST00000607049 HARSP12081 509 aaKnown RBP15.77■□□□□ 0.12
PKNOX1-210ENST00000607049 EPCAMP16422 314 aa15.77■□□□□ 0.12
PKNOX1-210ENST00000607049 LIG4P49917 911 aa15.77■□□□□ 0.12
PKNOX1-210ENST00000607049 CLCN4P51793 760 aa15.77■□□□□ 0.12
PKNOX1-210ENST00000607049 OSTNP61366 133 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms