RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 FGF13Q92913 245 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 NFKBIZQ9BYH8 718 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 TADA2AO75478 443 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 PDIA3P30101 505 aaKnown RBP16.67■□□□□ 0.26
SSBP4-214ENST00000607020 GRIK3Q13003 919 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 UBXN2BQ14CS0 331 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 ZBTB41Q5SVQ8 909 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 PPP4R3AQ6IN85 833 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 MAMSTRQ6ZN01 415 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 ST13P5Q8NFI4 369 aaPredicted RBP16.67■□□□□ 0.26
SSBP4-214ENST00000607020 LNX1Q8TBB1 728 aaPredicted RBP16.67■□□□□ 0.26
SSBP4-214ENST00000607020 PIK3R5Q8WYR1 880 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 RTKNQ9BST9 563 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 FAM126AQ9BYI3 521 aaPredicted RBP16.67■□□□□ 0.26
SSBP4-214ENST00000607020 C2orf16Q68DN1 1984 aa16.67■□□□□ 0.26
SSBP4-214ENST00000607020 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.264e-6■■■■■ 89
SSBP4-214ENST00000607020 SPTBN2O15020 2390 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 TBX3O15119 743 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 NCAM2O15394 837 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 SLC37A4O43826 429 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 XYLBO75191 536 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 NTHL1P78549 312 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 MBTD1Q05BQ5 628 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 TFDP1Q14186 410 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 RTP2Q5QGT7 225 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 PPM1LQ5SGD2 360 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 BLOC1S2Q6QNY1 142 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 KRT25Q7Z3Z0 450 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 GLYCTKQ8IVS8 523 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 JAKMIP1Q96N16 626 aaKnown RBP16.66■□□□□ 0.26
SSBP4-214ENST00000607020 MTRQ99707 1265 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 TTPALQ9BTX7 342 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 NXF3Q9H4D5 531 aaKnown RBP16.66■□□□□ 0.26
SSBP4-214ENST00000607020 ZSWIM4Q9H7M6 989 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 XPNPEP1Q9NQW7 623 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 PRMT8Q9NR22 394 aaPredicted RBP16.66■□□□□ 0.26
SSBP4-214ENST00000607020 SMG5Q9UPR3 1016 aaKnown RBP16.66■□□□□ 0.26
SSBP4-214ENST00000607020 DOCK8Q8NF50 2099 aa16.66■□□□□ 0.26
SSBP4-214ENST00000607020 A0A1B0GUA9 196 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 INO80B-WBP1J3KQ70 363 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 C8AP07357 584 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
SSBP4-214ENST00000607020 ARF4P18085 180 aaPredicted RBP16.65■□□□□ 0.26
SSBP4-214ENST00000607020 FZD5Q13467 585 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
SSBP4-214ENST00000607020 PDXDC1Q6P996 788 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 SLC27A1Q6PCB7 646 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 PRSS55Q6UWB4 352 aaPredicted RBP16.65■□□□□ 0.26
SSBP4-214ENST00000607020 TRIM22Q8IYM9 498 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 ITFG1Q8TB96 612 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 LXNQ9BS40 222 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 PHF20Q9BVI0 1012 aa16.65■□□□□ 0.26
SSBP4-214ENST00000607020 TRIM6Q9C030 488 aaPredicted RBP16.65■□□□□ 0.26
SSBP4-214ENST00000607020 CDV3Q9UKY7 258 aaKnown RBP16.65■□□□□ 0.26
SSBP4-214ENST00000607020 ECI2O75521 394 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 RPS6KB1P23443 525 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 AKAP5P24588 427 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 ARL2P36404 184 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
SSBP4-214ENST00000607020 TUSC3Q13454 348 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 RAB33AQ14088 237 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 INF2Q27J81 1249 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 XKR9Q5GH70 373 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 HAS1Q92839 578 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 APOL6Q9BWW8 343 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
SSBP4-214ENST00000607020 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
SSBP4-214ENST00000607020 RGL1Q9NZL6 768 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 MRPS17Q9Y2R5 130 aaKnown RBP16.64■□□□□ 0.25
SSBP4-214ENST00000607020 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.25
SSBP4-214ENST00000607020 SHISA7A6NL88 538 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 ZBTB39O15060 712 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 LYPLA2O95372 231 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 DEXIO95424 95 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 CD72P21854 359 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 TARSP26639 723 aaKnown RBP16.63■□□□□ 0.25
SSBP4-214ENST00000607020 HSPA4P34932 840 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
SSBP4-214ENST00000607020 ELAVL2Q12926 359 aaKnown RBP16.63■□□□□ 0.25
SSBP4-214ENST00000607020 PSMD5Q16401 504 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 ZNF852Q6ZMS4 543 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 NPAS3Q8IXF0 933 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-214ENST00000607020 BMP2KQ9NSY1 1161 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-214ENST00000607020 GDE1Q9NZC3 331 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 DNMT3BQ9UBC3 853 aaKnown RBP16.63■□□□□ 0.25
SSBP4-214ENST00000607020 FANCMQ8IYD8 2048 aa16.63■□□□□ 0.25
SSBP4-214ENST00000607020 CCL16O15467 120 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 SLITRK3O94933 977 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 ADRB1P08588 477 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 TDGF1P13385 188 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 ADCY1Q08828 1119 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 SPIRE1Q08AE8 756 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 CAPSQ13938 189 aa16.62■□□□□ 0.25
SSBP4-214ENST00000607020 AXDND1Q5T1B0 1012 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms