RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 TMEM8AQ9HCN3 771 aa17.12■□□□□ 0.33
CTSA-214ENST00000606788 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
CTSA-214ENST00000606788 NENFQ9UMX5 172 aa17.12■□□□□ 0.33
CTSA-214ENST00000606788 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
CTSA-214ENST00000606788 GOLGA6BA6NDN3 693 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 PGRMC1O00264 195 aaKnown RBP17.11■□□□□ 0.33
CTSA-214ENST00000606788 SYF2O95926 243 aaKnown RBP17.11■□□□□ 0.33
CTSA-214ENST00000606788 TMEM253P0C7T8 217 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 CD58P19256 250 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 MFAP3P55082 362 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 TUBB4BP68371 445 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 FMO1Q01740 532 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 CAPSQ13938 189 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 NOL9Q5SY16 702 aaKnown RBP17.11■□□□□ 0.33
CTSA-214ENST00000606788 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 THNSL1Q8IYQ7 743 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 AZI2Q9H6S1 392 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 ERVK-5Q9HDB9 667 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 ARHGAP28Q9P2N2 729 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 ATP2A1O14983 1001 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 HLA-DRAP01903 254 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 CLCN3P51790 818 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 TDRD10Q5VZ19 366 aaKnown RBP17.11■□□□□ 0.33
CTSA-214ENST00000606788 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
CTSA-214ENST00000606788 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 CEP120Q8N960 986 aa17.11■□□□□ 0.33
CTSA-214ENST00000606788 AENQ8WTP8 325 aaKnown RBP17.11■□□□□ 0.33
CTSA-214ENST00000606788 ANKRD62A6NC57 917 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 KRT14P02533 472 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 PDE6CP51160 858 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 ERVK-9P63128 1117 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 PNMA2Q9UL42 364 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 GINS2Q9Y248 185 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 MAFBQ9Y5Q3 323 aaPredicted RBP17.1■□□□□ 0.33
CTSA-214ENST00000606788 AGPSO00116 658 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 KCTD2Q14681 263 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 C12orf56Q8IXR9 622 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 SH2D3CQ8N5H7 860 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 OR2W6PQ8NHA6 318 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 SPIRE2Q8WWL2 714 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 NUP85Q9BW27 656 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 ST6GALNAC4Q9H4F1 302 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 NOCTQ9UK39 431 aaKnown RBP17.1■□□□□ 0.33
CTSA-214ENST00000606788 NFASCO94856 1347 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 SPOPO43791 374 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 CNMDO75829 334 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 COMTP21964 271 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 CDR1P51861 262 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 BRDTQ58F21 947 aaPredicted RBP17.1■□□□□ 0.33
CTSA-214ENST00000606788 TMEM270Q6UE05 265 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 ERO1BQ86YB8 467 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 FAM71AQ8IYT1 594 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 ANKRD13AQ8IZ07 590 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 RNPC3Q96LT9 517 aaKnown RBP17.1■□□□□ 0.33
CTSA-214ENST00000606788 FAM118BQ9BPY3 351 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 NTPCRQ9BSD7 190 aaKnown RBP17.1■□□□□ 0.33
CTSA-214ENST00000606788 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
CTSA-214ENST00000606788 TCRBV7S2A1N4TA0A589 114 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 B4GALT5O43286 388 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 DAPK3O43293 454 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 DKC1O60832 514 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTSA-214ENST00000606788 EPHX2P34913 555 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 TNNC1P63316 161 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■■□□ 18.7
CTSA-214ENST00000606788 NEUROG2Q9H2A3 272 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 PARP14Q460N5 1801 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 INO80B-WBP1J3KQ70 363 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 MCM3P25205 808 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 GJA5P36382 358 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 FLT3P36888 993 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
CTSA-214ENST00000606788 ORC1Q13415 861 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 MYBPC2Q14324 1141 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 CRELD2Q6UXH1 353 aaPredicted RBP17.09■□□□□ 0.33
CTSA-214ENST00000606788 DHX37Q8IY37 1157 aaKnown RBP17.09■□□□□ 0.33
CTSA-214ENST00000606788 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 MMP19Q99542 508 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 INO80BQ9C086 356 aaPredicted RBP17.09■□□□□ 0.33
CTSA-214ENST00000606788 DHX33Q9H6R0 707 aaKnown RBP17.09■□□□□ 0.33
CTSA-214ENST00000606788 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 PPP2R3BQ9Y5P8 575 aa17.09■□□□□ 0.33
CTSA-214ENST00000606788 TXNP10599 105 aaKnown RBP17.08■□□□□ 0.33
CTSA-214ENST00000606788 GPC5P78333 572 aa17.08■□□□□ 0.33
CTSA-214ENST00000606788 IFT20Q8IY31 132 aa17.08■□□□□ 0.33
CTSA-214ENST00000606788 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.33
CTSA-214ENST00000606788 SHC3Q92529 594 aa17.08■□□□□ 0.33
CTSA-214ENST00000606788 MFSD14AQ96MC6 490 aa17.08■□□□□ 0.33
CTSA-214ENST00000606788 TIPINQ9BVW5 301 aa17.08■□□□□ 0.33
CTSA-214ENST00000606788 PTPN22Q9Y2R2 807 aa17.08■□□□□ 0.33
CTSA-214ENST00000606788 ARL8AQ96BM9 186 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms