RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
HLA-F-230ENST00000606273 PCYT2Q99447 389 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 LZTS2Q9BRK4 669 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 KRTAP4-6Q9BYQ5 205 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
HLA-F-230ENST00000606273 RNF19AQ9NV58 838 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 NDFIP2Q9NV92 336 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 GINS2Q9Y248 185 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 MYH6P13533 1939 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 BAHCC1Q9P281 2608 aa13.76□□□□□ -0.21
HLA-F-230ENST00000606273 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 SHISA8B8ZZ34 492 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 GLULP15104 373 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 CA8P35219 290 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 BMS1Q14692 1282 aaKnown RBP13.75□□□□□ -0.21
HLA-F-230ENST00000606273 PLCB4Q15147 1175 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 LETM2Q2VYF4 491 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 ZNF528Q3MIS6 628 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 ODR4Q5SWX8 454 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 CABP7Q86V35 215 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 GALNT6Q8NCL4 622 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 TNPO1Q92973 898 aaKnown RBP13.75□□□□□ -0.21
HLA-F-230ENST00000606273 NIFKQ9BYG3 293 aaKnown RBP13.75□□□□□ -0.21
HLA-F-230ENST00000606273 IRAK3Q9Y616 596 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 OTOGLQ3ZCN5 2332 aa13.75□□□□□ -0.21
HLA-F-230ENST00000606273 C2CD2LO14523 706 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 PFKFB2O60825 505 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 N4BP1O75113 896 aaKnown RBP13.74□□□□□ -0.21
HLA-F-230ENST00000606273 CTDNEP1O95476 244 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 BMP4P12644 408 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 DSC3Q14574 896 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 RABEP1Q15276 862 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 MTHFD1LQ6UB35 978 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 KIAA0319LQ8IZA0 1049 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 VPS52Q8N1B4 723 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 LRRC43Q8N309 656 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 AUTS2Q8WXX7 1259 aa13.74□□□□□ -0.21
HLA-F-230ENST00000606273 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.73□□□□□ -0.21
HLA-F-230ENST00000606273 TMEM229AB2RXF0 380 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 NT5C1B-RDH14C9J2C7 533 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 ADAMTS3O15072 1205 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 SRFP11831 508 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 IFNAR1P17181 557 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 ATP4AP20648 1035 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 FGFR3P22607 806 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 CTBSQ01459 385 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 GIT2Q14161 759 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.21
HLA-F-230ENST00000606273 ANKRD1Q15327 319 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 ABI1Q8IZP0 508 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 GPR152Q8TDT2 470 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 GPRASP2Q96D09 838 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 CDHR1Q96JP9 859 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
HLA-F-230ENST00000606273 SFXN1Q9H9B4 322 aa13.73□□□□□ -0.21
HLA-F-230ENST00000606273 GDF2Q9UK05 429 aaPredicted RBP13.73□□□□□ -0.21
HLA-F-230ENST00000606273 CCDC196A0A1B0GTZ2 297 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 PRPF3O43395 683 aaKnown RBP13.72□□□□□ -0.21
HLA-F-230ENST00000606273 ITGB5P18084 799 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 KLRC1P26715 233 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
HLA-F-230ENST00000606273 SNRPNP63162 240 aaKnown RBP13.72□□□□□ -0.21
HLA-F-230ENST00000606273 PPM1JQ5JR12 505 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 PLPPR4Q7Z2D5 763 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 FAM228AQ86W67 206 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 SECISBP2LQ93073 1101 aaKnown RBP13.72□□□□□ -0.21
HLA-F-230ENST00000606273 AIFM3Q96NN9 605 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 SLC26A6Q9BXS9 759 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 AZI2Q9H6S1 392 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 ARHGEF3Q9NR81 526 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
HLA-F-230ENST00000606273 DNAAF2Q9NVR5 837 aaKnown RBP13.72□□□□□ -0.21
HLA-F-230ENST00000606273 SEC63Q9UGP8 760 aaKnown RBP13.72□□□□□ -0.21
HLA-F-230ENST00000606273 FBXO4Q9UKT5 387 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 CHD8Q9HCK8 2581 aa13.72□□□□□ -0.21
HLA-F-230ENST00000606273 LRRN2O75325 713 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 CTSAP10619 480 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 CRYBB1P53674 252 aaPredicted RBP13.71□□□□□ -0.21
HLA-F-230ENST00000606273 BCAR1P56945 870 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 ACAP1Q15027 740 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.21
HLA-F-230ENST00000606273 CLLU1OSQ5K130 101 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 DCLRE1AQ6PJP8 1040 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 USP17L6PQ6QN14 398 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 C15orf39Q6ZRI6 1047 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 PPFIBP1Q86W92 1011 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 ZBTB44Q8NCP5 570 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 PJA1Q8NG27 643 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 C1orf216Q8TAB5 229 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 EDARADDQ8WWZ3 215 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 ATRIPQ8WXE1 791 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 GTF3C6Q969F1 213 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 NXPE3Q969Y0 559 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 TMEM169Q96HH4 297 aa13.71□□□□□ -0.21
HLA-F-230ENST00000606273 FOXQ1Q9C009 403 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms