RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 SLC26A7Q8TE54 656 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 CHP1Q99653 195 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 L2HGDHQ9H9P8 463 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 FAM47DPA6NHR8 397 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 FAM107AO95990 144 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 DUOXA2Q1HG44 320 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 TEKT2Q9UIF3 430 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.29■■□□□ 1.16
SH3D19-211ENST00000604030 PP2D1A8MPX8 630 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 APOL1O14791 398 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 KRT16P08779 473 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 LSP1P33241 339 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 KLC1Q07866 573 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 C4orf22Q6V702 233 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 CCNYL1Q8N7R7 359 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 C1orf54Q8WWF1 131 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 IFT43Q96FT9 208 aa22.29■■□□□ 1.16
SH3D19-211ENST00000604030 FRMD8Q9BZ67 464 aaPredicted RBP22.28■■□□□ 1.16
SH3D19-211ENST00000604030 TBCCQ15814 346 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 ZNF394Q53GI3 561 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 C12orf60Q5U649 245 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 MLXIPLQ9NP71 852 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 MTO1Q9Y2Z2 717 aaKnown RBP22.28■■□□□ 1.16
SH3D19-211ENST00000604030 FXR1P51114 621 aaKnown RBP eCLIP22.28■■□□□ 1.16
SH3D19-211ENST00000604030 IGDCC4Q8TDY8 1250 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 PRMT1Q99873 361 aaKnown RBP22.28■■□□□ 1.16
SH3D19-211ENST00000604030 RBAKQ9NYW8 714 aaPredicted RBP22.28■■□□□ 1.16
SH3D19-211ENST00000604030 SERPINB10P48595 397 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 INPP5AQ14642 412 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 TRAPPC11Q7Z392 1133 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 SEC16BQ96JE7 1060 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 ERGIC2Q96RQ1 377 aa22.28■■□□□ 1.16
SH3D19-211ENST00000604030 STX18Q9P2W9 335 aaKnown RBP22.28■■□□□ 1.16
SH3D19-211ENST00000604030 PI4K2BG5E9Z4 385 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 KLHL2O95198 593 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 GALCP54803 685 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 FAM167BQ9BTA0 163 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 KITP10721 976 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 UCHL3P15374 230 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 KCNA4P22459 653 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 MAP3K10Q02779 954 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 CENPCQ03188 943 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 UGP2Q16851 508 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 KIAA1841Q6NSI8 718 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 CYFIP1Q7L576 1253 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 SRBD1Q8N5C6 995 aaKnown RBP22.27■■□□□ 1.16
SH3D19-211ENST00000604030 PPP1R2P1Q96PQ5 205 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 TRIM45Q9H8W5 580 aaPredicted RBP22.27■■□□□ 1.16
SH3D19-211ENST00000604030 HERC5Q9UII4 1024 aaKnown RBP22.27■■□□□ 1.16
SH3D19-211ENST00000604030 AGO2Q9UKV8 859 aaKnown RBP22.27■■□□□ 1.16
SH3D19-211ENST00000604030 CLTCL1P53675 1640 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 DDX5P17844 614 aaKnown RBP22.27■■□□□ 1.16
SH3D19-211ENST00000604030 ZNF746Q6NUN9 644 aaPredicted RBP22.27■■□□□ 1.16
SH3D19-211ENST00000604030 RAD9BQ6WBX8 426 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 TRPM8Q7Z2W7 1104 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 KRT35Q92764 455 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 ZNF609O15014 1411 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 FGFR4P22455 802 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 MED21Q13503 144 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 RABGAP1LQ5R372 815 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 DAB2IPQ5VWQ8 1189 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 SLC35G2Q8TBE7 412 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 BEGAINQ9BUH8 593 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 TSSK1BQ9BXA7 367 aa22.27■■□□□ 1.16
SH3D19-211ENST00000604030 POLR3FQ9H1D9 316 aaPredicted RBP22.27■■□□□ 1.16
SH3D19-211ENST00000604030 COL15A1P39059 1388 aa22.27■■□□□ 1.15
SH3D19-211ENST00000604030 SLC4A1P02730 911 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 ATG9AQ7Z3C6 839 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 SETD3Q86TU7 594 aaPredicted RBP22.26■■□□□ 1.15
SH3D19-211ENST00000604030 EXT2Q93063 718 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 F5H6K3 240 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 NMT2O60551 498 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 IRAK1P51617 712 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 TSPY1Q01534 308 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 KLRC3Q07444 240 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 KIF9Q9HAQ2 790 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 EHD2Q9NZN4 543 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 EIF3DO15371 548 aaKnown RBP eCLIP22.26■■□□□ 1.15
SH3D19-211ENST00000604030 PRUNE1Q86TP1 453 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 ZNF526Q8TF50 670 aaPredicted RBP22.26■■□□□ 1.15
SH3D19-211ENST00000604030 ULK4Q96C45 1275 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 TRIM49P0CI25 452 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 TRIM49CP0CI26 452 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 EIF3EP60228 445 aaKnown RBP22.26■■□□□ 1.15
SH3D19-211ENST00000604030 ACTR2P61160 394 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 MRPS35P82673 323 aaKnown RBP22.26■■□□□ 1.15
SH3D19-211ENST00000604030 PIGHQ14442 188 aaPredicted RBP22.26■■□□□ 1.15
SH3D19-211ENST00000604030 IMPG1Q17R60 797 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 WDR93Q6P2C0 686 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 ZNF560Q96MR9 790 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 PCSK1NQ9UHG2 260 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 PCDHA10Q9Y5I2 948 aa22.26■■□□□ 1.15
SH3D19-211ENST00000604030 FMO5P49326 533 aa22.25■■□□□ 1.15
SH3D19-211ENST00000604030 CDH6P55285 790 aa22.25■■□□□ 1.15
SH3D19-211ENST00000604030 FAM102AQ5T9C2 384 aaPredicted RBP22.25■■□□□ 1.15
SH3D19-211ENST00000604030 RBM15Q96T37 977 aaKnown RBP eCLIP22.25■■□□□ 1.152e-8■□□□□ 10.3
SH3D19-211ENST00000604030 CHCHD3Q9NX63 227 aaKnown RBP22.25■■□□□ 1.15
SH3D19-211ENST00000604030 ZFATQ9P243 1243 aa22.25■■□□□ 1.15
SH3D19-211ENST00000604030 ANP32DO95626 131 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms