RNA–Protein interactions for RNA: ENST00000603546.1

GNAS-256, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-256	ENST00000603546	EFNA5	P52803	228 aa		30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	OTOP3	Q7RTS5	596 aa		30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	ALYREF	Q86V81	257 aa	Known RBP	30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	HDAC7	Q8WUI4	952 aa		30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	RHOBTB2	Q9BYZ6	727 aa		30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	DDX19A	Q9NUU7	478 aa	Known RBP	30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	FNIP2	Q9P278	1114 aa		30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	WDFY4	Q6ZS81	3184 aa		30.03	■■■□□ 2.4
GNAS-256	ENST00000603546	LAD1	O00515	517 aa		30.02	■■■□□ 2.4
GNAS-256	ENST00000603546	LIG1	P18858	919 aa		30.02	■■■□□ 2.4
GNAS-256	ENST00000603546	RABEP1	Q15276	862 aa		30.02	■■■□□ 2.4
GNAS-256	ENST00000603546	RABGGTA	Q92696	567 aa		30.02	■■■□□ 2.4
GNAS-256	ENST00000603546	POLD4	Q9HCU8	107 aa		30.02	■■■□□ 2.4
GNAS-256	ENST00000603546	USP20	Q9Y2K6	914 aa		30.02	■■■□□ 2.4
GNAS-256	ENST00000603546	CCDC195	A0A1B0GUA6	201 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	TH	P07101	528 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	ASGR2	P07307	311 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	AVPR2	P30518	371 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	HSP90AA2P	Q14568	343 aa	Predicted RBP	30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	PRSS33	Q8NF86	280 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	SNX29	Q8TEQ0	813 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	B3GALT6	Q96L58	329 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	PLEKHA4	Q9H4M7	779 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	KIF3A	Q9Y496	699 aa		30.01	■■■□□ 2.39
GNAS-256	ENST00000603546	DENND4A	Q7Z401	1863 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	PTGES	O14684	152 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	RECQL4	O94761	1208 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	EDN1	P05305	212 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	PRPH	P41219	470 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	CREM	Q03060	361 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	EEF1DP3	Q658K8	133 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	PALB2	Q86YC2	1186 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	RIN2	Q8WYP3	895 aa	Predicted RBP	30	■■■□□ 2.39
GNAS-256	ENST00000603546	PAAF1	Q9BRP4	392 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	KIFC3	Q9BVG8	833 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	DNM3	Q9UQ16	869 aa		30	■■■□□ 2.39
GNAS-256	ENST00000603546	SF3B1	O75533	1304 aa	Known RBP eCLIP	29.99	■■■□□ 2.39	2e-6	■■■■□ 21.7
GNAS-256	ENST00000603546	DCAF4L1	Q3SXM0	396 aa		29.99	■■■□□ 2.39
GNAS-256	ENST00000603546	KRT79	Q5XKE5	535 aa		29.99	■■■□□ 2.39
GNAS-256	ENST00000603546	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	29.99	■■■□□ 2.39
GNAS-256	ENST00000603546	CACNG4	Q9UBN1	327 aa		29.99	■■■□□ 2.39
GNAS-256	ENST00000603546	PLXNA3	P51805	1871 aa		29.99	■■■□□ 2.39
GNAS-256	ENST00000603546	C2orf16	Q68DN1	1984 aa		29.99	■■■□□ 2.39
GNAS-256	ENST00000603546		K7ERI5	159 aa		29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	ST18	O60284	1047 aa		29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	PAPLN	O95428	1278 aa		29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	PTPN5	P54829	565 aa		29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	VCP	P55072	806 aa	Known RBP	29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	NT5DC1	Q5TFE4	455 aa		29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	LILRA6	Q6PI73	481 aa		29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	DTHD1	Q6ZMT9	781 aa		29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	WDR6	Q9NNW5	1121 aa	Known RBP	29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	MTCL1	Q9Y4B5	1905 aa	Known RBP	29.98	■■■□□ 2.39
GNAS-256	ENST00000603546	CASTOR2	A6NHX0	329 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	TGM5	O43548	720 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	PDGFB	P01127	241 aa	Predicted RBP	29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	SPATA31D3	P0C874	917 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	NAB2	Q15742	525 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	IL17A	Q16552	155 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	ATF7IP2	Q5U623	682 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	SPATA31D4	Q6ZUB0	917 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	CXCL16	Q9H2A7	254 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	SMOC2	Q9H3U7	446 aa		29.97	■■■□□ 2.39
GNAS-256	ENST00000603546	KMT2E	Q8IZD2	1858 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546		E9PMD0	336 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	RFPL2	O75678	378 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	MYB	P10242	640 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	MRE11	P49959	708 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	TTPAL	Q9BTX7	342 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	NT5C3A	Q9H0P0	336 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	TNFSF13B	Q9Y275	285 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	GDA	Q9Y2T3	454 aa		29.96	■■■□□ 2.39
GNAS-256	ENST00000603546	PP2D1	A8MPX8	630 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	RPL17	P18621	184 aa	Known RBP	29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	NUBP1	P53384	320 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	TCF15	Q12870	199 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	RILPL1	Q5EBL4	403 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	RTP2	Q5QGT7	225 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	MCTP1	Q6DN14	999 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	HASPIN	Q8TF76	798 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	SMG7	Q92540	1137 aa	Known RBP	29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	STAM	Q92783	540 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	TMEM134	Q9H6X4	195 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	ZDHHC7	Q9NXF8	308 aa		29.95	■■■□□ 2.39
GNAS-256	ENST00000603546	CCDC169	A6NNP5	214 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	KIF4A	O95239	1232 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	CDC25A	P30304	524 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	NPTX2	P47972	431 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	PEX3	P56589	373 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	ELAVL2	Q12926	359 aa	Known RBP	29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	TDG	Q13569	410 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	FAM171A1	Q5VUB5	890 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	PRSS55	Q6UWB4	352 aa	Predicted RBP	29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	GLYCTK	Q8IVS8	523 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	ZNF707	Q96C28	371 aa	Predicted RBP	29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	MMTAG2	Q9BU76	263 aa	Known RBP	29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	KCNK12	Q9HB15	430 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	IGSF9	Q9P2J2	1179 aa		29.94	■■■□□ 2.38
GNAS-256	ENST00000603546	RINT1	Q6NUQ1	792 aa		29.93	■■■□□ 2.38

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