RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 CACNG4Q9UBN1 327 aa23.41■■□□□ 1.34
PPFIA3-209ENST00000602783 USP20Q9Y2K6 914 aa23.41■■□□□ 1.34
PPFIA3-209ENST00000602783 PCDHB6Q9Y5E3 794 aa23.41■■□□□ 1.34
PPFIA3-209ENST00000602783 ZMYM2Q9UBW7 1377 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 RFPL2O75678 378 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 PRKCBP05771 671 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 CCT6AP40227 531 aaKnown RBP23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 MAPK6Q16659 721 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 GLYCTKQ8IVS8 523 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 DEPTORQ8TB45 409 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 RIN2Q8WYP3 895 aaPredicted RBP23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 TBC1D32Q96NH3 1257 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 C2orf16Q68DN1 1984 aa23.4■■□□□ 1.34
PPFIA3-209ENST00000602783 CACNA1HO95180 2353 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 MUTP22033 750 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 GJB2P29033 226 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 NAMPTP43490 491 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 PTGDRQ13258 359 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 TUSC3Q13454 348 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 HSP90AA2PQ14568 343 aaPredicted RBP23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 ECM1Q16610 540 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 MCTP1Q6DN14 999 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 PAAF1Q9BRP4 392 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 LRWD1Q9UFC0 647 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 DENND4AQ7Z401 1863 aa23.39■■□□□ 1.33
PPFIA3-209ENST00000602783 CASTOR2A6NHX0 329 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 ACKR2O00590 384 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 TGM5O43548 720 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 RPL17P18621 184 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 PPP2R5AQ15172 486 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 CYP26C1Q6V0L0 522 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 GPR65Q8IYL9 337 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 HDAC7Q8WUI4 952 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 SMG7Q92540 1137 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 ADPGKQ9BRR6 497 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 CCDC113Q9H0I3 377 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 MFSD1Q9H3U5 465 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 PLEKHA4Q9H4M7 779 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 KCNK12Q9HB15 430 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 WDR6Q9NNW5 1121 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 FNIP2Q9P278 1114 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 PLXNA3P51805 1871 aa23.38■■□□□ 1.33
PPFIA3-209ENST00000602783 N4BP1O75113 896 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 THP07101 528 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 GBP2P32456 591 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 MCM2P49736 904 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 NUBP1P53384 320 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 TDGQ13569 410 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 IGSF22Q8N9C0 903 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 SNX29Q8TEQ0 813 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 HASPINQ8TF76 798 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 STAMQ92783 540 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 IFT74Q96LB3 600 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 KIFC3Q9BVG8 833 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 RHOBTB2Q9BYZ6 727 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 CXCL16Q9H2A7 254 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 BHMT2Q9H2M3 363 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 FAM86C1Q9NVL1 165 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 KIAA1024Q9UPX6 916 aa23.37■■□□□ 1.33
PPFIA3-209ENST00000602783 SF3B1O75533 1304 aaKnown RBP eCLIP23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 H0Y858 1186 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 PTGESO14684 152 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 RECQL4O94761 1208 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 C1RP00736 705 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 EDN1P05305 212 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 CREMQ03060 361 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 EEF1DP3Q658K8 133 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 LILRA6Q6PI73 481 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 PRSS55Q6UWB4 352 aaPredicted RBP23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 TMEM105Q8N8V8 129 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 ATOH1Q92858 354 aaPredicted RBP23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 ZNF707Q96C28 371 aaPredicted RBP23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 RAB34Q9BZG1 259 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 NT5C3AQ9H0P0 336 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 IRF2BPLQ9H1B7 796 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 PIDD1Q9HB75 910 aa23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.36■■□□□ 1.33
PPFIA3-209ENST00000602783 CLUHO75153 1309 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 PP2D1A8MPX8 630 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 H3BQV1 296 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 LAD1O00515 517 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 PDIA5Q14554 519 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 RTP2Q5QGT7 225 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 ASTLQ6HA08 431 aaPredicted RBP23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 CEP57Q86XR8 500 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 KIFAP3Q92845 792 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 DDX19AQ9NUU7 478 aaKnown RBP23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 IGSF9Q9P2J2 1179 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 GDAQ9Y2T3 454 aa23.35■■□□□ 1.33
PPFIA3-209ENST00000602783 GALR2O43603 387 aaPredicted RBP23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 KIF4AO95239 1232 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 PRPHP41219 470 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 EFNA5P52803 228 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 IL17AQ16552 155 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 FAM171A1Q5VUB5 890 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 TTPALQ9BTX7 342 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 ZDHHC7Q9NXF8 308 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 DUSP12Q9UNI6 340 aa23.34■■□□□ 1.33
PPFIA3-209ENST00000602783 SMC3Q9UQE7 1217 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms