RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 N4BP3O15049 544 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 TGM5O43548 720 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 PRKCBP05771 671 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 RPL17P18621 184 aaKnown RBP14.54□□□□□ -0.08
RPS28-204ENST00000602140 LIG1P18858 919 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 CYP11B2P19099 503 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 CLCN5P51795 746 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 TUSC3Q13454 348 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 PRPF4BQ13523 1007 aaKnown RBP14.54□□□□□ -0.08
RPS28-204ENST00000602140 HSP90AA2PQ14568 343 aaPredicted RBP14.54□□□□□ -0.08
RPS28-204ENST00000602140 MAPK6Q16659 721 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 GPR65Q8IYL9 337 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 FLCNQ8NFG4 579 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 HASPINQ8TF76 798 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 STAMQ92783 540 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 ZNF707Q96C28 371 aaPredicted RBP14.54□□□□□ -0.08
RPS28-204ENST00000602140 FOXP1Q9H334 677 aaPredicted RBP14.54□□□□□ -0.08
RPS28-204ENST00000602140 PIDD1Q9HB75 910 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 SNTG2Q9NY99 539 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 FNIP2Q9P278 1114 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 IGSF9Q9P2J2 1179 aa14.54□□□□□ -0.08
RPS28-204ENST00000602140 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.08
RPS28-204ENST00000602140 PTGESO14684 152 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 GFRA3O60609 400 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 RECQL4O94761 1208 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 C1RP00736 705 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 NAMPTP43490 491 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 ORC2Q13416 577 aaPredicted RBP14.53□□□□□ -0.08
RPS28-204ENST00000602140 RTP2Q5QGT7 225 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 TTC38Q5R3I4 469 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 CWF19L1Q69YN2 538 aaKnown RBP14.53□□□□□ -0.08
RPS28-204ENST00000602140 LILRA6Q6PI73 481 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 PRSS55Q6UWB4 352 aaPredicted RBP14.53□□□□□ -0.08
RPS28-204ENST00000602140 NOSTRINQ8IVI9 506 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 DEPTORQ8TB45 409 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 RSAD2Q8WXG1 361 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 MYADMQ96S97 322 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 ADPGKQ9BRR6 497 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 LLPHQ9BRT6 129 aaKnown RBP14.53□□□□□ -0.08
RPS28-204ENST00000602140 NT5C3AQ9H0P0 336 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 CXCL16Q9H2A7 254 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 POLD4Q9HCU8 107 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 ZDHHC7Q9NXF8 308 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 FBXL21Q9UKT6 434 aa14.53□□□□□ -0.08
RPS28-204ENST00000602140 ACKR2O00590 384 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 NARSO43776 548 aaKnown RBP14.52□□□□□ -0.09
RPS28-204ENST00000602140 ST18O60284 1047 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 KIF4AO95239 1232 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 PAPLNO95428 1278 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 EDN1P05305 212 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 THP07101 528 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 NPR3P17342 541 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 CCT6AP40227 531 aaKnown RBP14.52□□□□□ -0.09
RPS28-204ENST00000602140 RBM25P49756 843 aaKnown RBP14.52□□□□□ -0.09
RPS28-204ENST00000602140 CREMQ03060 361 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 GNL2Q13823 731 aaKnown RBP14.52□□□□□ -0.09
RPS28-204ENST00000602140 PPP2R5AQ15172 486 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 ECM1Q16610 540 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 FAM171A1Q5VUB5 890 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 ERICH6BQ5W0A0 696 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 EEF1DP3Q658K8 133 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 CEP57Q86XR8 500 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 SIX5Q8N196 739 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 FBXO18Q8NFZ0 1043 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 KIFC3Q9BVG8 833 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 PRKD2Q9BZL6 878 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 CCDC113Q9H0I3 377 aa14.52□□□□□ -0.09
RPS28-204ENST00000602140 MYO15AQ9UKN7 3530 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 CACNA1HO95180 2353 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 PI15O43692 258 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 CFHP08603 1231 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 MUTP22033 750 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 HMGN5P82970 282 aaKnown RBP14.51□□□□□ -0.09
RPS28-204ENST00000602140 NBR1Q14596 966 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 NAB2Q15742 525 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 HAUS3Q68CZ6 603 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 GET4Q7L5D6 327 aaPredicted RBP14.51□□□□□ -0.09
RPS28-204ENST00000602140 FAM184AQ8NB25 1140 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 IFT74Q96LB3 600 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 TTPALQ9BTX7 342 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 BHMT2Q9H2M3 363 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 EPS15L1Q9UBC2 864 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 GDAQ9Y2T3 454 aa14.51□□□□□ -0.09
RPS28-204ENST00000602140 ZFHX2Q9C0A1 2572 aaPredicted RBP14.51□□□□□ -0.09
RPS28-204ENST00000602140 PROB1E7EW31 1015 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 ZMYND10O75800 440 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 AOC1P19801 751 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 TRAPPC10P48553 1259 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
RPS28-204ENST00000602140 EFNA5P52803 228 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 PSMD5Q16401 504 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 SLC44A3Q8N4M1 653 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 C4orf32Q8N8J7 132 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 LNX1Q8TBB1 728 aaPredicted RBP14.5□□□□□ -0.09
RPS28-204ENST00000602140 PIK3R5Q8WYR1 880 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 KIFAP3Q92845 792 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 CLSTN3Q9BQT9 956 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.5□□□□□ -0.097e-6■■■■□ 20.5
RPS28-204ENST00000602140 LRWD1Q9UFC0 647 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 NOL7Q9UMY1 257 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms