RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 KLHDC7AQ5VTJ3 777 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 KRT39Q6A163 491 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 SERINC5Q86VE9 423 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 FMNL3Q8IVF7 1028 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 CCDC155Q8N6L0 562 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 EHBP1Q8NDI1 1231 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 CPLX3Q8WVH0 158 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 BAP1Q92560 729 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 TCHPQ9BT92 498 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 FAM207AQ9NSI2 230 aaPredicted RBP15.61■□□□□ 0.09
ZNF548-212ENST00000602086 ANKFY1Q9P2R3 1169 aa15.61■□□□□ 0.09
ZNF548-212ENST00000602086 CPSF3Q9UKF6 684 aaKnown RBP15.61■□□□□ 0.09
ZNF548-212ENST00000602086 TTLL13PA6NNM8 815 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 LRRIQ3A6PVS8 624 aaPredicted RBP15.6■□□□□ 0.09
ZNF548-212ENST00000602086 TSPAN1O60635 241 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 ERLIN2O94905 339 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 TRIM49P0CI25 452 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 TRIM49CP0CI26 452 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 MATR3P43243 847 aaKnown RBP eCLIP15.6■□□□□ 0.09
ZNF548-212ENST00000602086 MXI1P50539 228 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 DLG4P78352 724 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 PPP3CAQ08209 521 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 MTFR1Q15390 333 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 DCAF4L1Q3SXM0 396 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 ZNF568Q3ZCX4 644 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 CBWD6Q4V339 395 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 EPC2Q52LR7 807 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 CBWD3Q5JTY5 395 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 CBWD5Q5RIA9 395 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 TRIM65Q6PJ69 517 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 CYP26C1Q6V0L0 522 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 C15orf39Q6ZRI6 1047 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 LMO3Q8TAP4 145 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 DNAJB3Q8WWF6 145 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 SCLT1Q96NL6 688 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 CRACR2AQ9BSW2 395 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 TMEM117Q9H0C3 514 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.6■□□□□ 0.09
ZNF548-212ENST00000602086 FAM49AQ9H0Q0 323 aaPredicted RBP15.6■□□□□ 0.09
ZNF548-212ENST00000602086 SIX2Q9NPC8 291 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 AGPAT5Q9NUQ2 364 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 ZNHIT6Q9NWK9 470 aaKnown RBP15.6■□□□□ 0.09
ZNF548-212ENST00000602086 RBAKQ9NYW8 714 aaPredicted RBP15.6■□□□□ 0.09
ZNF548-212ENST00000602086 GCNT4Q9P109 453 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 PYCARDQ9ULZ3 195 aa15.6■□□□□ 0.09
ZNF548-212ENST00000602086 EPHB6O15197 1021 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 B4GALT5O43286 388 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 ZC3H11AO75152 810 aaKnown RBP eCLIP15.59■□□□□ 0.09
ZNF548-212ENST00000602086 CAND2O75155 1236 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 IL18RAPO95256 599 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 UCHL3P15374 230 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 ARF4P18085 180 aaPredicted RBP15.59■□□□□ 0.09
ZNF548-212ENST00000602086 SLC9A1P19634 815 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 CHMP4BP1P59074 171 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 KIZQ2M2Z5 673 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 GDF6Q6KF10 455 aaPredicted RBP15.59■□□□□ 0.09
ZNF548-212ENST00000602086 PDXDC1Q6P996 788 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 CACNA2D4Q7Z3S7 1137 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 SLC43A3Q8NBI5 491 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 FAM81BQ96LP2 452 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 GLT1D1Q96MS3 346 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 FNBP1Q96RU3 617 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 CGRRF1Q99675 332 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 ADPGKQ9BRR6 497 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 CELF4Q9BZC1 486 aaKnown RBP15.59■□□□□ 0.09
ZNF548-212ENST00000602086 CDT1Q9H211 546 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 PDZD7Q9H5P4 517 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 PAK6Q9NQU5 681 aaPredicted RBP15.59■□□□□ 0.09
ZNF548-212ENST00000602086 PHF24Q9UPV7 400 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 GRIN2DO15399 1336 aa15.59■□□□□ 0.09
ZNF548-212ENST00000602086 H0YGN5 161 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 CCP110O43303 1012 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 CLTAP09496 248 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 GCLMP48507 274 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 ACOT2P49753 483 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 POLR2FP61218 127 aaKnown RBP15.58■□□□□ 0.08
ZNF548-212ENST00000602086 MRPS6P82932 125 aaKnown RBP15.58■□□□□ 0.08
ZNF548-212ENST00000602086 ZNF200P98182 395 aaPredicted RBP15.58■□□□□ 0.08
ZNF548-212ENST00000602086 GOLGA8FQ08AF8 430 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 GOLGA8DPQ0D2H9 430 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 PTK7Q13308 1070 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 ITGA7Q13683 1181 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 SNX17Q15036 470 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 TMEM132AQ24JP5 1023 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 ZACNQ401N2 412 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 EEF1DP3Q658K8 133 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 WDR49Q8IV35 697 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 CCDC127Q96BQ5 260 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 INTS2Q9H0H0 1204 aaKnown RBP15.58■□□□□ 0.08
ZNF548-212ENST00000602086 SPTLC3Q9NUV7 552 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 AIPL1Q9NZN9 384 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 APEX2Q9UBZ4 518 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 TRPV2Q9Y5S1 764 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 ALPK3Q96L96 1907 aa15.58■□□□□ 0.08
ZNF548-212ENST00000602086 ANK1P16157 1881 aa15.57■□□□□ 0.08
ZNF548-212ENST00000602086 M0QZ92 97 aa15.57■□□□□ 0.08
ZNF548-212ENST00000602086 B4GALT4O60513 344 aa15.57■□□□□ 0.08
ZNF548-212ENST00000602086 C4BPAP04003 597 aaKnown RBP15.57■□□□□ 0.08
ZNF548-212ENST00000602086 JAM2P57087 298 aa15.57■□□□□ 0.08
ZNF548-212ENST00000602086 NOTUMQ6P988 496 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms