RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 SHC4Q6S5L8 630 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 TMC7Q7Z402 723 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 HAUS6Q7Z4H7 955 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 VPS52Q8N1B4 723 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 MICAL1Q8TDZ2 1067 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 PPP2R3CQ969Q6 453 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 ZBTB45Q96K62 511 aaPredicted RBP19.21■□□□□ 0.67
IRF3-230ENST00000601809 NECAB3Q96P71 396 aaPredicted RBP19.21■□□□□ 0.67
IRF3-230ENST00000601809 TLE6Q9H808 572 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 ENTPD7Q9NQZ7 604 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 CCDC39Q9UFE4 941 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 FAN1Q9Y2M0 1017 aa19.21■□□□□ 0.67
IRF3-230ENST00000601809 PIGRP01833 764 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 MCF2P10911 925 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 SMTNP53814 917 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 SMC1AQ14683 1233 aaKnown RBP19.2■□□□□ 0.66
IRF3-230ENST00000601809 RRAGBQ5VZM2 374 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 ATL3Q6DD88 541 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 MPZL3Q6UWV2 235 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 ZPBP2Q6X784 338 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 PPP1R10Q96QC0 940 aaKnown RBP19.2■□□□□ 0.66
IRF3-230ENST00000601809 PAAF1Q9BRP4 392 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 STRA6Q9BX79 667 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 ST6GALNAC4Q9H4F1 302 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 PARVGQ9HBI0 331 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 CITO14578 2027 aa19.2■□□□□ 0.66
IRF3-230ENST00000601809 FRMD3A2A2Y4 597 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 CUTAO60888 179 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 TOM1L1O75674 476 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 IL9P15248 144 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 OR1G1P47890 313 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 MCL1Q07820 350 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 COASYQ13057 564 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 PTPN14Q15678 1187 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 ZNF568Q3ZCX4 644 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 PTCRAQ6ISU1 281 aaPredicted RBP19.19■□□□□ 0.66
IRF3-230ENST00000601809 TAS1R1Q7RTX1 841 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 RASSF8Q8NHQ8 419 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 AUTS2Q8WXX7 1259 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 DDX12PQ92771 950 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 FAM193BQ96PV7 902 aaPredicted RBP19.19■□□□□ 0.66
IRF3-230ENST00000601809 UHRF1Q96T88 793 aaPredicted RBP19.19■□□□□ 0.66
IRF3-230ENST00000601809 CACNG4Q9UBN1 327 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 GDAQ9Y2T3 454 aa19.19■□□□□ 0.66
IRF3-230ENST00000601809 PRG3Q9Y2Y8 225 aaPredicted RBP19.19■□□□□ 0.66
IRF3-230ENST00000601809 MBTPS2O43462 519 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 TRAK2O60296 914 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 FAM189A1O60320 539 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 CLASP2O75122 1294 aaKnown RBP19.18■□□□□ 0.66
IRF3-230ENST00000601809 PPP1R37O75864 691 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 FAM13AO94988 1023 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 CXCL14O95715 111 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 SOD2P04179 222 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 SCP2P22307 547 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 TXLNAP40222 546 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 GTF2BQ00403 316 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 DNM1Q05193 864 aaKnown RBP19.18■□□□□ 0.66
IRF3-230ENST00000601809 TUSC3Q13454 348 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 TMEM132AQ24JP5 1023 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 PUS10Q3MIT2 529 aaKnown RBP19.18■□□□□ 0.66
IRF3-230ENST00000601809 SLC39A4Q6P5W5 647 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 CCDC73Q6ZRK6 1079 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 MYCT1Q8N699 235 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 SMRP1Q8NCR6 262 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 RPS6KC1Q96S38 1066 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 HERC2P3Q9BVR0 1158 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 CHST7Q9NS84 486 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 STK39Q9UEW8 545 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 RCOR1Q9UKL0 485 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 BARX2Q9UMQ3 279 aaPredicted RBP19.18■□□□□ 0.66
IRF3-230ENST00000601809 TBX20Q9UMR3 447 aa19.18■□□□□ 0.66
IRF3-230ENST00000601809 FSD2A1L4K1 749 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 H0YCG3 227 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 THP07101 528 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 NMT1P30419 496 aaKnown RBP19.17■□□□□ 0.66
IRF3-230ENST00000601809 FOXD4L6Q3SYB3 417 aaPredicted RBP19.17■□□□□ 0.66
IRF3-230ENST00000601809 CD300LGQ6UXG3 332 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 FOXD4L3Q6VB84 417 aaPredicted RBP19.17■□□□□ 0.66
IRF3-230ENST00000601809 SV2BQ7L1I2 683 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 MAP4K3Q8IVH8 894 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 FAM178BQ8IXR5 827 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 KCNG4Q8TDN1 519 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 CHAMP1Q96JM3 812 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 SNX27Q96L92 541 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 ZMAT2Q96NC0 199 aaKnown RBP19.17■□□□□ 0.66
IRF3-230ENST00000601809 PANK2Q9BZ23 570 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 GPR62Q9BZJ7 368 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 CD320Q9NPF0 282 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 CD207Q9UJ71 328 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 PCDHA7Q9UN72 937 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 VWA8A3KMH1 1905 aa19.17■□□□□ 0.66
IRF3-230ENST00000601809 TCHHQ07283 1943 aa19.16■□□□□ 0.66
IRF3-230ENST00000601809 K7ENM7 598 aa19.16■□□□□ 0.66
IRF3-230ENST00000601809 IGFBP6P24592 240 aaPredicted RBP19.16■□□□□ 0.66
IRF3-230ENST00000601809 NDUFV1P49821 464 aa19.16■□□□□ 0.66
IRF3-230ENST00000601809 STRN3Q13033 797 aa19.16■□□□□ 0.66
IRF3-230ENST00000601809 SMAD4Q13485 552 aaKnown RBP19.16■□□□□ 0.66
IRF3-230ENST00000601809 NOLC1Q14978 699 aaKnown RBP eCLIP19.16■□□□□ 0.66
IRF3-230ENST00000601809 SMAD2Q15796 467 aaKnown RBP19.16■□□□□ 0.66
IRF3-230ENST00000601809 KIAA0319Q5VV43 1072 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms