RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
SHANK2-218ENST00000601538 NQO1P15559 274 aaKnown RBP12.89□□□□□ -0.35
SHANK2-218ENST00000601538 C16orf72Q14CZ0 275 aa12.89□□□□□ -0.35
SHANK2-218ENST00000601538 ZCCHC17Q9NP64 241 aaKnown RBP12.89□□□□□ -0.35
SHANK2-218ENST00000601538 TNKSO95271 1327 aa12.89□□□□□ -0.35
SHANK2-218ENST00000601538 EDC4Q6P2E9 1401 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 GRK2P25098 689 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 TNFRSF8P28908 595 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 LONP2Q86WA8 852 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 AHI1Q8N157 1196 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 ZFP42Q96MM3 310 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 KLHL8Q9P2G9 620 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 P4HA2O15460 535 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 SEC24DO94855 1032 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 KRT76Q01546 638 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 TSPAN17Q96FV3 270 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 FAM47DPA6NHR8 397 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 C5orf58C9J3I9 102 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 H2AFYO75367 372 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 ARHGAP17Q68EM7 881 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 ASZ1Q8WWH4 475 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 SPAG6O75602 509 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 MSL3P1P0C860 447 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 CCNE1P24864 410 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 GPC5P78333 572 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 PDAP1Q13442 181 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 RESP18Q5W5W9 173 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 APOL4Q9BPW4 351 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 WFS1O76024 890 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 BNC1Q01954 994 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 NOP9Q86U38 636 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 KANSL1LA0AUZ9 987 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 CENPXA8MT69 81 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 E4F1Q66K89 784 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 LRRC31Q6UY01 552 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 SEPT1Q8WYJ6 367 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 KLHL20Q9Y2M5 609 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 TNPO2O14787 897 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 COBLO75128 1261 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 XIAPP98170 497 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 TBC1D10BQ4KMP7 808 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 IYDQ6PHW0 289 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 RAB42Q8N4Z0 105 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 BTN2A2Q8WVV5 523 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 LGALS16A8MUM7 142 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 KRT73Q86Y46 540 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 STOML2Q9UJZ1 356 aa12.88□□□□□ -0.35
SHANK2-218ENST00000601538 SRPRBQ9Y5M8 271 aaKnown RBP12.88□□□□□ -0.35
SHANK2-218ENST00000601538 ANKRD26Q9UPS8 1709 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 H3BNX3 289 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 UNC13BO14795 1591 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 RBBP7Q16576 425 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 PRR23CQ6ZRP0 262 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 EFL1Q7Z2Z2 1120 aaKnown RBP12.87□□□□□ -0.35
SHANK2-218ENST00000601538 SQORQ9Y6N5 450 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 GNL1P36915 607 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-218ENST00000601538 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 ZNF184Q99676 751 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-218ENST00000601538 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 OSBPL10Q9BXB5 764 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 RXFP1Q9HBX9 757 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 GPS1Q13098 491 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
SHANK2-218ENST00000601538 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 ATP8B4Q8TF62 1192 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 ANAPC7Q9UJX3 599 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 TBXAS1P24557 533 aaPredicted RBP12.87□□□□□ -0.35
SHANK2-218ENST00000601538 KCNQ4P56696 695 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 UGP2Q16851 508 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 P3H2Q8IVL5 708 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 LINC00301Q8NCQ3 95 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 KIAA1586Q9HCI6 787 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 RNF103O00237 685 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 HMOX2P30519 316 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
SHANK2-218ENST00000601538 SUPT20HQ8NEM7 779 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 DIS3LQ8TF46 1054 aaKnown RBP12.87□□□□□ -0.35
SHANK2-218ENST00000601538 OSBPL8Q9BZF1 889 aa12.87□□□□□ -0.35
SHANK2-218ENST00000601538 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms