RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 RPL17P18621 184 aaKnown RBP19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 HSP90AA2PQ14568 343 aaPredicted RBP19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 ECM1Q16610 540 aa19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 RTP2Q5QGT7 225 aa19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 PADI6Q6TGC4 694 aa19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 RSAD2Q8WXG1 361 aa19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 RIN2Q8WYP3 895 aaPredicted RBP19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 SMG7Q92540 1137 aaKnown RBP19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 SNTG2Q9NY99 539 aa19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 LIMCH1Q9UPQ0 1083 aa19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 CLUHO75153 1309 aa19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 ZFHX2Q9C0A1 2572 aaPredicted RBP19.9■□□□□ 0.78
CHMP2A-208ENST00000601220 ACKR2O00590 384 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 NARSO43776 548 aaKnown RBP19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 ST18O60284 1047 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 GFRA3O60609 400 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 TADA2AO75478 443 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 OR52Z1P0C646 297 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 PLXNA3P51805 1871 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 ORC2Q13416 577 aaPredicted RBP19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 TUSC3Q13454 348 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 C2orf16Q68DN1 1984 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 PRSS55Q6UWB4 352 aaPredicted RBP19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 FOXP1Q9H334 677 aaPredicted RBP19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 ZDHHC7Q9NXF8 308 aa19.89■□□□□ 0.77
CHMP2A-208ENST00000601220 AOC1P19801 751 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 IGFBP6P24592 240 aaPredicted RBP19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 SAFBQ15424 915 aaKnown RBP eCLIP19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 EEF1DP3Q658K8 133 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 GLYCTKQ8IVS8 523 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 CCDC83Q8IWF9 413 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 ZBTB8OSQ8IWT0 167 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 SLC44A3Q8N4M1 653 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 FBXO18Q8NFZ0 1043 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 LNX1Q8TBB1 728 aaPredicted RBP19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 C8orf76Q96K31 380 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 CLSTN3Q9BQT9 956 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 LLPHQ9BRT6 129 aaKnown RBP19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 PRKD2Q9BZL6 878 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 C2orf40Q9H1Z8 148 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 MFSD1Q9H3U5 465 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 POLD4Q9HCU8 107 aa19.88■□□□□ 0.77
CHMP2A-208ENST00000601220 CASTOR2A6NHX0 329 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 N4BP3O15049 544 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 RECQL4O94761 1208 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 KIF4AO95239 1232 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 PRKCBP05771 671 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 MUTP22033 750 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 GBP2P32456 591 aaPredicted RBP19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 NBL1P41271 181 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 NAMPTP43490 491 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 PRPF4BQ13523 1007 aaKnown RBP19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 MAPK6Q16659 721 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 ERICH6BQ5W0A0 696 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 ELMSAN1Q6PJG2 1045 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 NOSTRINQ8IVI9 506 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 FLCNQ8NFG4 579 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 ERMNQ8TAM6 284 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 STAMQ92783 540 aa19.87■□□□□ 0.77
CHMP2A-208ENST00000601220 SF3B1O75533 1304 aaKnown RBP eCLIP19.86■□□□□ 0.772e-6■■■■■ 55.7
CHMP2A-208ENST00000601220 ARHGEF35A5YM69 484 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 ZMYND10O75800 440 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 THP07101 528 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 LAMP2P13473 410 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 FXR2P51116 673 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 CREMQ03060 361 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 TTC38Q5R3I4 469 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 NT5DC1Q5TFE4 455 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 CD300LGQ6UXG3 332 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 SIX5Q8N196 739 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 HASPINQ8TF76 798 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 PIK3R5Q8WYR1 880 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 TTPALQ9BTX7 342 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 KIFC3Q9BVG8 833 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 WNT16Q9UBV4 365 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 FBXW11Q9UKB1 542 aa19.86■□□□□ 0.77
CHMP2A-208ENST00000601220 KRBA1A5PL33 1030 aa19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 ANHXE9PGG2 379 aa19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 ADAM12O43184 909 aa19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 FAM171A1Q5VUB5 890 aa19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 ASCL5Q7RTU5 278 aa19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 NXPE3Q969Y0 559 aa19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 KIF2CQ99661 725 aa19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.85■□□□□ 0.77
CHMP2A-208ENST00000601220 TDRD15B5MCY1 1934 aaKnown RBP19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 EIF5BO60841 1220 aaKnown RBP19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 TRAPPC10P48553 1259 aa19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 RBM25P49756 843 aaKnown RBP19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 TOB1P50616 345 aaPredicted RBP19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 NBR1Q14596 966 aa19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 CCDC105Q8IYK2 499 aa19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 DEPTORQ8TB45 409 aa19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 BHMT2Q9H2M3 363 aa19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 PIDD1Q9HB75 910 aa19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 FBXL21Q9UKT6 434 aa19.84■□□□□ 0.77
CHMP2A-208ENST00000601220 CFHP08603 1231 aa19.83■□□□□ 0.77
CHMP2A-208ENST00000601220 CCT6AP40227 531 aaKnown RBP19.83■□□□□ 0.77
CHMP2A-208ENST00000601220 HTR4Q13639 388 aa19.83■□□□□ 0.77
CHMP2A-208ENST00000601220 PDIA5Q14554 519 aa19.83■□□□□ 0.77
CHMP2A-208ENST00000601220 PPP2R5AQ15172 486 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms