RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 ZNF302Q9NR11 478 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 SUCLA2Q9P2R7 463 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 ZC3H4Q9UPT8 1303 aaKnown RBP12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 TCRBV7S2A1N4TA0A589 114 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 CYP11B1P15538 503 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 KCNA2P16389 499 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 SLCO1A2P46721 670 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 STXBP2Q15833 593 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 TMEM270Q6UE05 265 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 GPD1LQ8N335 351 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 C1orf54Q8WWF1 131 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 KIFAP3Q92845 792 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 C11orf70Q9BRQ4 267 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 MSTO1Q9BUK6 570 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 GDF3Q9NR23 364 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 FBXO40Q9UH90 709 aa12.39□□□□□ -0.43
ARHGEF1-220ENST00000600274 PFASO15067 1338 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 GJB1P08034 283 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 AARSP49588 968 aaKnown RBP eCLIP12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 ZNF280AP59817 542 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 DRP2Q13474 957 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 LY6KQ17RY6 165 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 PCDHB4Q9Y5E5 795 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 TULP2O00295 520 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 MUTP22033 750 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 HSD17B3P37058 310 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 CDR1P51861 262 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 WNT7BP56706 349 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 ITIH3Q06033 890 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 ALCAMQ13740 583 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 TRAPPC12Q8WVT3 735 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 GINS2Q9Y248 185 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 CSADQ9Y600 493 aa12.38□□□□□ -0.43
ARHGEF1-220ENST00000600274 GOLGA8KD6RF30 607 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 NOP56O00567 594 aaKnown RBP12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 CLDN3O15551 220 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 DGAT1O75907 488 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 VGLL4Q14135 290 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 PPP1R7Q15435 360 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 NIPA1Q7RTP0 329 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 SLC9A9Q8IVB4 645 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 MAP4K3Q8IVH8 894 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 ACTRT1Q8TDG2 376 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 ASAP3Q8TDY4 903 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 NLRP4Q96MN2 994 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 RBAKQ9NYW8 714 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 PYGMP11217 842 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 MAPK4P31152 587 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 NCKAP1LP55160 1127 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 FBXW10Q5XX13 1052 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 USP37Q86T82 979 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 THNSL1Q8IYQ7 743 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 TAB3Q8N5C8 712 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 MCPH1Q8NEM0 835 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 PPP1R13LQ8WUF5 828 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 ATG4AQ8WYN0 398 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 GPRASP2Q96D09 838 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 HES6Q96HZ4 224 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 CLMNQ96JQ2 1002 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 TMEM8AQ9HCN3 771 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 HOXC10Q9NYD6 342 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 RTN2O75298 545 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 ERLIN2O94905 339 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 GGPS1O95749 300 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 CHRNB2P17787 502 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 KIF22Q14807 665 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 KAZNQ674X7 775 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 KCTD17Q8N5Z5 321 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 SCFD2Q8WU76 684 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 STRA6Q9BX79 667 aa12.37□□□□□ -0.43
ARHGEF1-220ENST00000600274 HLA-DRAP01903 254 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 CFHP08603 1231 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 KRT19P08727 400 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 MAPTP10636 758 aaKnown RBP12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 TMOD1P28289 359 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 IRAK1P51617 712 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 SEC24CP53992 1094 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 FMO1Q01740 532 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 SULF1Q8IWU6 871 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 RHOT2Q8IXI1 618 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 FMO2Q99518 471 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 MTFR1LQ9H019 292 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 CD2APQ9Y5K6 639 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
ARHGEF1-220ENST00000600274 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms