RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 LLGL2Q6P1M3 1020 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 SV2BQ7L1I2 683 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 COLGALT2Q8IYK4 626 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 DAW1Q8N136 415 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 USP28Q96RU2 1077 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 ACO2Q99798 780 aaKnown RBP15.51■□□□□ 0.07
LIG1-218ENST00000599322 LRRC27Q9C0I9 530 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 ZBP1Q9H171 429 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 ARHGAP28Q9P2N2 729 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 FBXO2Q9UK22 296 aaPredicted RBP15.51■□□□□ 0.07
LIG1-218ENST00000599322 CFAP45Q9UL16 551 aa15.51■□□□□ 0.07
LIG1-218ENST00000599322 C2orf71A6NGG8 1288 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 HIDE1A8MVS5 230 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 SPTLC2O15270 562 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 MBTPS2O43462 519 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 SOD2P04179 222 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 ZSCAN22P10073 491 aaPredicted RBP15.5■□□□□ 0.07
LIG1-218ENST00000599322 MCF2P10911 925 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 KLRC2P26717 231 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 LTBRP36941 435 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 AFF1P51825 1210 aaKnown RBP15.5■□□□□ 0.07
LIG1-218ENST00000599322 COASYQ13057 564 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 MAPK7Q13164 816 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 FOXD4L5Q5VV16 416 aaPredicted RBP15.5■□□□□ 0.07
LIG1-218ENST00000599322 ATL3Q6DD88 541 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 MPZL3Q6UWV2 235 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 ZPBP2Q6X784 338 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 ZBTB33Q86T24 672 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 FOXD4L4Q8WXT5 416 aaPredicted RBP15.5■□□□□ 0.07
LIG1-218ENST00000599322 EPSTI1Q96J88 318 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 ACAP3Q96P50 834 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 REEP2Q9BRK0 252 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 TARS2Q9BW92 718 aaKnown RBP15.5■□□□□ 0.07
LIG1-218ENST00000599322 SLC38A7Q9NVC3 462 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 DZANK1Q9NVP4 752 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 BARX2Q9UMQ3 279 aaPredicted RBP15.5■□□□□ 0.07
LIG1-218ENST00000599322 IRAK3Q9Y616 596 aa15.5■□□□□ 0.07
LIG1-218ENST00000599322 MORC2Q9Y6X9 1032 aaPredicted RBP15.5■□□□□ 0.07
LIG1-218ENST00000599322 K7ENM7 598 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 CLDN3O15551 220 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 TRAK2O60296 914 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 TBX10O75333 385 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 TOM1L1O75674 476 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 GRM5P41594 1212 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 STAT6P42226 847 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 GLUD2P49448 558 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 LIG4P49917 911 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 CREMQ03060 361 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 GRIN1Q05586 938 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 DLX2Q07687 328 aaPredicted RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 DSC1Q08554 894 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 ELAVL2Q12926 359 aaKnown RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 BECN1Q14457 450 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 SMAD2Q15796 467 aaKnown RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 KYAT1Q16773 422 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 SPECC1Q5M775 1068 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 EEF1DP3Q658K8 133 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 TMEM184AQ6ZMB5 413 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 HAUS6Q7Z4H7 955 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 CLIC6Q96NY7 704 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.49■□□□□ 0.073e-7■□□□□ 10.4
LIG1-218ENST00000599322 MIOSQ9NXC5 875 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 ANKFY1Q9P2R3 1169 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 TFIP11Q9UBB9 837 aaKnown RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 ADAM28Q9UKQ2 775 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 USP20Q9Y2K6 914 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 HCN4Q9Y3Q4 1203 aa15.49■□□□□ 0.07
LIG1-218ENST00000599322 ARIH1Q9Y4X5 557 aaPredicted RBP15.49■□□□□ 0.07
LIG1-218ENST00000599322 SF3B1O75533 1304 aaKnown RBP eCLIP15.48■□□□□ 0.07
LIG1-218ENST00000599322 NPHP3-ACAD11A0A0J9YXS1 232 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 TTLL13PA6NNM8 815 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 C2CD2LO14523 706 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 TRAPPC3O43617 180 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 PPP6R2O75170 966 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 YEATS4O95619 227 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 ADH1AP07327 375 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 MAPTP10636 758 aaKnown RBP15.48■□□□□ 0.07
LIG1-218ENST00000599322 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
LIG1-218ENST00000599322 USP41Q3LFD5 358 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 ARSHQ5FYA8 562 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 ANKRD54Q6NXT1 300 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 PDXDC1Q6P996 788 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 TMEM173Q86WV6 379 aaPredicted RBP15.48■□□□□ 0.07
LIG1-218ENST00000599322 ADHFE1Q8IWW8 467 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 TMEM161BQ8NDZ6 487 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 KCNG4Q8TDN1 519 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 MSLNLQ96KJ4 702 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 UROC1Q96N76 676 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 HERC2P3Q9BVR0 1158 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 CDT1Q9H211 546 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 CLEC1BQ9P126 229 aa15.48■□□□□ 0.07
LIG1-218ENST00000599322 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.48■□□□□ 0.07
LIG1-218ENST00000599322 HNRNPDLO14979 420 aaKnown RBP15.47■□□□□ 0.07
LIG1-218ENST00000599322 CUTAO60888 179 aa15.47■□□□□ 0.07
LIG1-218ENST00000599322 CLASP2O75122 1294 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms