RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 TTC12Q9H892 705 aaPredicted RBP21.31■■□□□ 1
IRF3-222ENST00000599144 ANKEF1Q9NU02 776 aa21.31■■□□□ 1
IRF3-222ENST00000599144 DPP7Q9UHL4 492 aa21.31■■□□□ 1
IRF3-222ENST00000599144 A0A1B0GUA9 196 aa21.3■■□□□ 1
IRF3-222ENST00000599144 POTEMA6NI47 508 aa21.3■■□□□ 1
IRF3-222ENST00000599144 ZMYND10O75800 440 aa21.3■■□□□ 1
IRF3-222ENST00000599144 KIF4AO95239 1232 aa21.3■■□□□ 1
IRF3-222ENST00000599144 LYPLA2O95372 231 aa21.3■■□□□ 1
IRF3-222ENST00000599144 LIG1P18858 919 aa21.3■■□□□ 1
IRF3-222ENST00000599144 ATP2B1P20020 1258 aa21.3■■□□□ 1
IRF3-222ENST00000599144 ID4P47928 161 aa21.3■■□□□ 1
IRF3-222ENST00000599144 HSP90AA2PQ14568 343 aaPredicted RBP21.3■■□□□ 1
IRF3-222ENST00000599144 PARM1Q6UWI2 310 aa21.3■■□□□ 1
IRF3-222ENST00000599144 CYP26C1Q6V0L0 522 aa21.3■■□□□ 1
IRF3-222ENST00000599144 HACE1Q8IYU2 909 aa21.3■■□□□ 1
IRF3-222ENST00000599144 RHOBTB2Q9BYZ6 727 aa21.3■■□□□ 1
IRF3-222ENST00000599144 ARHGEF3Q9NR81 526 aa21.3■■□□□ 1
IRF3-222ENST00000599144 ZDHHC7Q9NXF8 308 aa21.3■■□□□ 1
IRF3-222ENST00000599144 SNTG2Q9NY99 539 aa21.3■■□□□ 1
IRF3-222ENST00000599144 COL4A3Q01955 1670 aa21.3■■□□□ 1
IRF3-222ENST00000599144 BTBD18B2RXH4 712 aa21.29■■□□□ 1
IRF3-222ENST00000599144 CCL16O15467 120 aa21.29■■□□□ 1
IRF3-222ENST00000599144 EDN1P05305 212 aa21.29■■□□□ 1
IRF3-222ENST00000599144 FSHRP23945 695 aa21.29■■□□□ 1
IRF3-222ENST00000599144 POU5F1BQ06416 359 aa21.29■■□□□ 1
IRF3-222ENST00000599144 PCBP1Q15365 356 aaKnown RBP eCLIP21.29■■□□□ 1
IRF3-222ENST00000599144 HDAC7Q8WUI4 952 aa21.29■■□□□ 1
IRF3-222ENST00000599144 BSNDQ8WZ55 320 aa21.29■■□□□ 1
IRF3-222ENST00000599144 FGF14Q92915 247 aa21.29■■□□□ 1
IRF3-222ENST00000599144 CLSTN3Q9BQT9 956 aa21.29■■□□□ 1
IRF3-222ENST00000599144 TMEM60Q9H2L4 133 aa21.29■■□□□ 1
IRF3-222ENST00000599144 POLD4Q9HCU8 107 aa21.29■■□□□ 1
IRF3-222ENST00000599144 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.29■■□□□ 1
IRF3-222ENST00000599144 FNIP2Q9P278 1114 aa21.29■■□□□ 1
IRF3-222ENST00000599144 ANHXE9PGG2 379 aa21.28■■□□□ 1
IRF3-222ENST00000599144 PTGESO14684 152 aa21.28■■□□□ 1
IRF3-222ENST00000599144 JAK2O60674 1132 aa21.28■■□□□ 1
IRF3-222ENST00000599144 GLULP15104 373 aa21.28■■□□□ 1
IRF3-222ENST00000599144 GPC5P78333 572 aa21.28■■□□□ 1
IRF3-222ENST00000599144 FAM171A1Q5VUB5 890 aa21.28■■□□□ 1
IRF3-222ENST00000599144 DCLRE1AQ6PJP8 1040 aa21.28■■□□□ 1
IRF3-222ENST00000599144 NOSTRINQ8IVI9 506 aa21.28■■□□□ 1
IRF3-222ENST00000599144 PDZD7Q9H5P4 517 aa21.28■■□□□ 1
IRF3-222ENST00000599144 DLGAP2Q9P1A6 1054 aa21.28■■□□□ 1
IRF3-222ENST00000599144 FBXW11Q9UKB1 542 aa21.28■■□□□ 1
IRF3-222ENST00000599144 POLIQ9UNA4 740 aa21.28■■□□□ 1
IRF3-222ENST00000599144 ARID2Q68CP9 1835 aa21.27■■□□□ 1
IRF3-222ENST00000599144 EPB41L2O43491 1005 aaKnown RBP21.27■■□□□ 1
IRF3-222ENST00000599144 MED24O75448 989 aa21.27■■□□□ 1
IRF3-222ENST00000599144 PAPLNO95428 1278 aa21.27■■□□□ 1
IRF3-222ENST00000599144 SPATA31C1P0DKV0 1188 aa21.27■■□□□ 1
IRF3-222ENST00000599144 TUSC3Q13454 348 aa21.27■■□□□ 1
IRF3-222ENST00000599144 PSMD5Q16401 504 aa21.27■■□□□ 1
IRF3-222ENST00000599144 EEF1DP3Q658K8 133 aa21.27■■□□□ 1
IRF3-222ENST00000599144 ITFG1Q8TB96 612 aa21.27■■□□□ 1
IRF3-222ENST00000599144 LNX1Q8TBB1 728 aaPredicted RBP21.27■■□□□ 1
IRF3-222ENST00000599144 NFKBIZQ9BYH8 718 aa21.27■■□□□ 1
IRF3-222ENST00000599144 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.27■■□□□ 16e-9■■■□□ 17.9
IRF3-222ENST00000599144 SIT1Q9Y3P8 196 aa21.27■■□□□ 1
IRF3-222ENST00000599144 SF3B1O75533 1304 aaKnown RBP eCLIP21.27■□□□□ 0.993e-7■■■■■ 55.1
IRF3-222ENST00000599144 NEMFO60524 1076 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 RECQL4O94761 1208 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 C8AP07357 584 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 ME3Q16798 604 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 TMEM132AQ24JP5 1023 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 DIS3L2Q8IYB7 885 aaKnown RBP21.26■□□□□ 0.99
IRF3-222ENST00000599144 KIAA2013Q8IYS2 634 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 MTMR9Q96QG7 549 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 TTPALQ9BTX7 342 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 BRMS1Q9HCU9 246 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 HCFC1R1Q9NWW0 138 aa21.26■□□□□ 0.99
IRF3-222ENST00000599144 LMNAP02545 664 aaKnown RBP21.25■□□□□ 0.99
IRF3-222ENST00000599144 SP9P0CG40 484 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 SNW1Q13573 536 aaKnown RBP21.25■□□□□ 0.99
IRF3-222ENST00000599144 NAB2Q15742 525 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 GLRA4Q5JXX5 417 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 PPM1LQ5SGD2 360 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 LIN9Q5TKA1 542 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 PPP4R3CPQ6ZMV5 832 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 CATSPER3Q86XQ3 398 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 DCLK2Q8N568 766 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 WASF1Q92558 559 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 NXPE3Q969Y0 559 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 RMDN1Q96DB5 314 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 KIFC3Q9BVG8 833 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 FZD8Q9H461 694 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 GDAQ9Y2T3 454 aa21.25■□□□□ 0.99
IRF3-222ENST00000599144 RIF1Q5UIP0 2472 aaKnown RBP21.24■□□□□ 0.99
IRF3-222ENST00000599144 MCM7P33993 719 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 FOXK2Q01167 660 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 GUCY1B3Q02153 619 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 PHLDB3Q6NSJ2 640 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 RSPO2Q6UXX9 243 aaPredicted RBP21.24■□□□□ 0.99
IRF3-222ENST00000599144 NSUN7Q8NE18 718 aaKnown RBP21.24■□□□□ 0.99
IRF3-222ENST00000599144 SLC7A14Q8TBB6 771 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 ING5Q8WYH8 240 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 PIK3R5Q8WYR1 880 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 FGF13Q92913 245 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 KXD1Q9BQD3 176 aa21.24■□□□□ 0.99
IRF3-222ENST00000599144 SLC2A4RGQ9NR83 387 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms