RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 IRS1P35568 1242 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 POU5F1Q01860 360 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 KRT17Q04695 432 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 GRIK3Q13003 919 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 KCNC3Q14003 757 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 CCDC85BQ15834 202 aaPredicted RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 TCEAL5Q5H9L2 206 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 SPOUT1Q5T280 376 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 SLC39A4Q6P5W5 647 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 DYMQ7RTS9 669 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 GPR65Q8IYL9 337 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 THNSL1Q8IYQ7 743 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 ZBTB45Q96K62 511 aaPredicted RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 PPP1R10Q96QC0 940 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 NGRNQ9NPE2 291 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 TLR9Q9NR96 1032 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 FAM13BQ9NYF5 915 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 PUF60Q9UHX1 559 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 INPP5FQ9Y2H2 1132 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 NRP1O14786 923 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 ACTN4O43707 911 aaKnown RBP19.32■□□□□ 0.68
USHBP1-209ENST00000598570 LILRB3O75022 631 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 NMT1P30419 496 aaKnown RBP19.32■□□□□ 0.68
USHBP1-209ENST00000598570 PBX3P40426 434 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 SCNN1GP51170 649 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 AMPD3Q01432 767 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 RNASELQ05823 741 aaKnown RBP19.32■□□□□ 0.68
USHBP1-209ENST00000598570 SFR1Q86XK3 245 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 MRPL43Q8N983 215 aaKnown RBP19.32■□□□□ 0.68
USHBP1-209ENST00000598570 PRDM6Q9NQX0 595 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 MARCH5Q9NX47 278 aa19.32■□□□□ 0.68
USHBP1-209ENST00000598570 CITO14578 2027 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 ZC3H11AO75152 810 aaKnown RBP eCLIP19.31■□□□□ 0.68
USHBP1-209ENST00000598570 HYAL1Q12794 435 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 ADAM15Q13444 863 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 ALCAMQ13740 583 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 KYAT1Q16773 422 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 ZC2HC1CQ53FD0 456 aaPredicted RBP19.31■□□□□ 0.68
USHBP1-209ENST00000598570 TMEM184AQ6ZMB5 413 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.31■□□□□ 0.68
USHBP1-209ENST00000598570 DHX58Q96C10 678 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 PABPC5Q96DU9 382 aaKnown RBP19.31■□□□□ 0.68
USHBP1-209ENST00000598570 PLEKHA5Q9HAU0 1116 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 PANK4Q9NVE7 773 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 KLK14Q9P0G3 267 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 FAN1Q9Y2M0 1017 aa19.31■□□□□ 0.68
USHBP1-209ENST00000598570 TTC28Q96AY4 2481 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 NCOR1O75376 2440 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 SMIM28A0A1B0GU29 152 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 PVALEFA0A1B0GWK0 134 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 CLDN3O15551 220 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 PFKFB1P16118 471 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 LIG1P18858 919 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 LTBRP36941 435 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 TUSC3Q13454 348 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 NOLC1Q14978 699 aaKnown RBP eCLIP19.3■□□□□ 0.68
USHBP1-209ENST00000598570 ZBTB6Q15916 424 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 SLC10A6Q3KNW5 377 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 ZNF568Q3ZCX4 644 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 EPM2AIP1Q7L775 607 aaPredicted RBP19.3■□□□□ 0.68
USHBP1-209ENST00000598570 CEP120Q8N960 986 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 HLA-CQ95604 372 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 TSPAN18Q96SJ8 248 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 CDCA3Q99618 268 aaPredicted RBP19.3■□□□□ 0.68
USHBP1-209ENST00000598570 ZBP1Q9H171 429 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 CNTN3Q9P232 1028 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 PARP2Q9UGN5 583 aa19.3■□□□□ 0.68
USHBP1-209ENST00000598570 PDCD11Q14690 1871 aaKnown RBP19.29■□□□□ 0.68
USHBP1-209ENST00000598570 TTC26A0AVF1 554 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 NT5C1B-RDH14C9J2C7 533 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 K7ENM7 598 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 MYL1P05976 194 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 THP07101 528 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 CLTAP09496 248 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 CTSAP10619 480 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 HERC4Q5GLZ8 1057 aaPredicted RBP19.29■□□□□ 0.68
USHBP1-209ENST00000598570 L1TD1Q5T7N2 865 aaKnown RBP19.29■□□□□ 0.68
USHBP1-209ENST00000598570 CCDC65Q8IXS2 484 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 EFHBQ8N7U6 833 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 TMEM169Q96HH4 297 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 SNX27Q96L92 541 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 ACAP3Q96P50 834 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 CCDC94Q9BW85 323 aaPredicted RBP19.29■□□□□ 0.68
USHBP1-209ENST00000598570 APOL6Q9BWW8 343 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 CHST7Q9NS84 486 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 THEGQ9P2T0 379 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 PCDHB13Q9Y5F0 798 aa19.29■□□□□ 0.68
USHBP1-209ENST00000598570 FSD2A1L4K1 749 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 C2orf71A6NGG8 1288 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 ANKRD63C9JTQ0 380 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 TMEM189-UBE2V1I3L0A0 370 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 C1RP00736 705 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 ADSSP30520 456 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 HOXD13P35453 343 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 CASP5P51878 434 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 DUSP6Q16828 381 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 SLFN12LQ6IEE8 588 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 CD300LGQ6UXG3 332 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 UNC13DQ70J99 1090 aa19.28■□□□□ 0.68
USHBP1-209ENST00000598570 ADGRD2Q7Z7M1 963 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms