RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 RIT2Q99578 217 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 CLSTN3Q9BQT9 956 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 PAAF1Q9BRP4 392 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 TEKT3Q9BXF9 490 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 UBN1Q9NPG3 1134 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 BMP2KQ9NSY1 1161 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 DNMT3BQ9UBC3 853 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 ADAM28Q9UKQ2 775 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 SETXQ7Z333 2677 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 IGF2RP11717 2491 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 AKAP13Q12802 2813 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 ZBTB43O43298 467 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 NR1I2O75469 434 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 HNRNPA1P09651 372 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 KRT32Q14532 448 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 PFKFB3Q16875 520 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 LIN9Q5TKA1 542 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 TANGO2Q6ICL3 276 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 HASPINQ8TF76 798 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 KCNB2Q92953 911 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 CPB2Q96IY4 423 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 ZMYND12Q9H0C1 365 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 LMAN1LQ9HAT1 526 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 MRPS17Q9Y2R5 130 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 F5P12259 2224 aa15.35■□□□□ 0.05
SHKBP1-208ENST00000595726 DMXL2Q8TDJ6 3036 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 CHURC1-FNTBB4DL54 471 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 NRG2O14511 850 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 LRP3O75074 770 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 TADA2AO75478 443 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 PSMD10O75832 226 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 REC8O95072 547 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 AKAP5P24588 427 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 HOXC13P31276 330 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 HSPA4P34932 840 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 ADD1P35611 737 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 FNTBP49356 437 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 EXOSC10Q01780 885 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 SATB1Q01826 763 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 LAMTOR4Q0VGL1 99 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 DHX32Q7L7V1 743 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 SRGAP1Q7Z6B7 1085 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 CEP57Q86XR8 500 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 GSTCDQ8NEC7 633 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 SLC7A14Q8TBB6 771 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 CHRDQ9H2X0 955 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 RXFP3Q9NSD7 469 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 KLK14Q9P0G3 267 aa15.34■□□□□ 0.05
SHKBP1-208ENST00000595726 GOLGA8AA7E2F4 631 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 XYLBO75191 536 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 PROS1P07225 676 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 SHC2P98077 582 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 GRM2Q14416 872 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 ACAP1Q15027 740 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 SF3A2Q15428 464 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 CCDC6Q16204 474 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 PABPC1LQ4VXU2 614 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 AXDND1Q5T1B0 1012 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 IL31Q6EBC2 164 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 GPR65Q8IYL9 337 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 CNNM3Q8NE01 707 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 LNX1Q8TBB1 728 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 NXF3Q9H4D5 531 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 MRPS23Q9Y3D9 190 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 SNX14Q9Y5W7 946 aa15.33■□□□□ 0.04
SHKBP1-208ENST00000595726 SDK1Q7Z5N4 2213 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 ESYT2A0FGR8 921 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 C1QTNF9BB2RNN3 333 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 TM4SF5O14894 197 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 TSPAN1O60635 241 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 ECI2O75521 394 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 HMGB1P09429 215 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 C1QTNF9P0C862 333 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 GAS6Q14393 721 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 SLC5A9Q2M3M2 681 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 FAM171A1Q5VUB5 890 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 HEATR6Q6AI08 1181 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 B3GNT9Q6UX72 402 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 CDR2LQ86X02 465 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 RNF149Q8NC42 400 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 DDX1Q92499 740 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 NAP1L2Q9ULW6 460 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 NOTCH4Q99466 2003 aa15.32■□□□□ 0.04
SHKBP1-208ENST00000595726 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 EPB41L2O43491 1005 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 ERLIN2O94905 339 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 CPA1P15085 419 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 HOXA9P31269 272 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 CXCL12P48061 93 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 CCR3P51677 355 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 CREMQ03060 361 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 PSMD5Q16401 504 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 MAMSTRQ6ZN01 415 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 RDM1Q8NG50 284 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 PSPC1Q8WXF1 523 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 SLC7A3Q8WY07 619 aa15.31■□□□□ 0.04
SHKBP1-208ENST00000595726 JAKMIP1Q96N16 626 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms