RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CDR2Q01850 454 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 KRT17Q04695 432 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 ACVR2BQ13705 512 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 E2F5Q15329 346 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 KCTD19Q17RG1 926 aaPredicted RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 PADI6Q6TGC4 694 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 CEP128Q6ZU80 1094 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 PODNQ7Z5L7 613 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 RELL1Q8IUW5 271 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 BBOF1Q8ND07 529 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 MIEF2Q96C03 454 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 ZNF653Q96CK0 615 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 RSRC1Q96IZ7 334 aaKnown RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 ZNF577Q9BSK1 485 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 DEFB129Q9H1M3 183 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 PRKAG3Q9UGI9 489 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 COQ4Q9Y3A0 265 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 CEP83Q9Y592 693 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 COL11A2P13942 1736 aaPredicted RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 ADGRA3Q8IWK6 1321 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 TCP11X1B4DZS4 312 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 TP73O15350 636 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 ENTPD3O75355 529 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 CCND1P24385 295 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 GTF2BQ00403 316 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 ENPEPQ07075 957 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 PTP4A2Q12974 167 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 FAM133BQ5BKY9 247 aaKnown RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 RNF43Q68DV7 783 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 ZNF746Q6NUN9 644 aaPredicted RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 TBC1D1Q86TI0 1168 aaPredicted RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 RIBC1Q8N443 379 aaPredicted RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 TCP11Q8WWU5 503 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 L3MBTL3Q96JM7 780 aaPredicted RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 FAM81BQ96LP2 452 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 MAGEB18Q96M61 343 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 KREMEN1Q96MU8 473 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 FOXP3Q9BZS1 431 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 TMEM117Q9H0C3 514 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 CCDC113Q9H0I3 377 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 ECT2Q9H8V3 914 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 RXFP1Q9HBX9 757 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 AVENQ9NQS1 362 aaPredicted RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 HSPBP1Q9NZL4 362 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 SUFUQ9UMX1 484 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 AGAP1Q9UPQ3 857 aa14.17□□□□□ -0.14
VRK3-209ENST00000594948 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
VRK3-209ENST00000594948 SCN9AQ15858 1988 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 PLA2G6O60733 806 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 WFS1O76024 890 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 LYPLA2O95372 231 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 CFBP00751 764 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 CLTAP09496 248 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 PLS3P13797 630 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 IVDP26440 423 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 PDE6BP35913 854 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 SLC1A1P43005 524 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 GCLMP48507 274 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 CENPCQ03188 943 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 TCP10Q12799 353 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 LONRF1Q17RB8 773 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 DOK7Q18PE1 504 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 SGO2Q562F6 1265 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 ACAD10Q6JQN1 1059 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 ARHGEF18Q6ZSZ5 1173 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.14
VRK3-209ENST00000594948 NIPA1Q7RTP0 329 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 UHMK1Q8TAS1 419 aaKnown RBP14.16□□□□□ -0.14
VRK3-209ENST00000594948 KIFAP3Q92845 792 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 TRAIPQ9BWF2 469 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 ARHGEF3Q9NR81 526 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
VRK3-209ENST00000594948 PTPN22Q9Y2R2 807 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 C15orf41Q9Y2V0 281 aa14.16□□□□□ -0.14
VRK3-209ENST00000594948 G3V3G9 751 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 GDF11O95390 407 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 GAS8O95995 478 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 P4HBP07237 508 aaKnown RBP14.15□□□□□ -0.14
VRK3-209ENST00000594948 NPR1P16066 1061 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 KCNJ1P48048 391 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 GPC3P51654 580 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 DCAF8Q5TAQ9 597 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 ASRGL1Q7L266 308 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 PNMA8AQ86V59 439 aaPredicted RBP14.15□□□□□ -0.14
VRK3-209ENST00000594948 CCDC25Q86WR0 208 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 ANKRD27Q96NW4 1050 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 DDX23Q9BUQ8 820 aaKnown RBP14.15□□□□□ -0.14
VRK3-209ENST00000594948 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 LRRC4BQ9NT99 713 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 FGFR1OP2Q9NVK5 253 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 CYP26A1O43174 497 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 ARP10275 920 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 CYP11B1P15538 503 aa14.15□□□□□ -0.14
VRK3-209ENST00000594948 GBP2P32456 591 aaPredicted RBP14.15□□□□□ -0.14
VRK3-209ENST00000594948 GTF2H1P32780 548 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms