RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PDZD7Q9H5P4 517 aa16.48■□□□□ 0.23
VRK3-207ENST00000594092 TOPORSQ9NS56 1045 aaPredicted RBP16.48■□□□□ 0.23
VRK3-207ENST00000594092 RBAKQ9NYW8 714 aaPredicted RBP16.48■□□□□ 0.23
VRK3-207ENST00000594092 PMM2O15305 246 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 P4HA2O15460 535 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 DLATP10515 647 aaKnown RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 EIF4BP23588 611 aaKnown RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 TNFSF9P41273 254 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 CCAR2Q8N163 923 aaKnown RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 EDEM3Q9BZQ6 932 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 TMEM117Q9H0C3 514 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 SIX2Q9NPC8 291 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 CEP72Q9P209 647 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 TULP1O00294 542 aaPredicted RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 FECHP22830 423 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 GTF2H1P32780 548 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 MXI1P50539 228 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 CRYBB1P53674 252 aaPredicted RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 CLDN10P78369 228 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 SNX17Q15036 470 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 SLC9C1Q4G0N8 1177 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 KLHDC7AQ5VTJ3 777 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 E4F1Q66K89 784 aaPredicted RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 TRIM65Q6PJ69 517 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 CATSPER4Q7RTX7 472 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 BRSK2Q8IWQ3 736 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 TMEM40Q8WWA1 233 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 BAP1Q92560 729 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 WNT8BQ93098 351 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 GLT1D1Q96MS3 346 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 PDE11AQ9HCR9 933 aa16.47■□□□□ 0.23
VRK3-207ENST00000594092 CPSF3Q9UKF6 684 aaKnown RBP16.47■□□□□ 0.23
VRK3-207ENST00000594092 A0A1B0GUA9 196 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 MCF2P10911 925 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 POLR2FP61218 127 aaKnown RBP16.46■□□□□ 0.23
VRK3-207ENST00000594092 MRPS6P82932 125 aaKnown RBP16.46■□□□□ 0.23
VRK3-207ENST00000594092 PCBP1Q15365 356 aaKnown RBP eCLIP16.46■□□□□ 0.23
VRK3-207ENST00000594092 MTFR1Q15390 333 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 EPC2Q52LR7 807 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 TMTC1Q8IUR5 882 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 THNSL1Q8IYQ7 743 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 CEP120Q8N960 986 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 LMO3Q8TAP4 145 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 FNBP1Q96RU3 617 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
VRK3-207ENST00000594092 INTS2Q9H0H0 1204 aaKnown RBP16.46■□□□□ 0.23
VRK3-207ENST00000594092 TMEM8AQ9HCN3 771 aa16.46■□□□□ 0.23
VRK3-207ENST00000594092 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
VRK3-207ENST00000594092 A0A1W2PQ45 241 aaPredicted RBP16.45■□□□□ 0.22
VRK3-207ENST00000594092 A0A1W2PQY0 241 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 HOXA11P31270 313 aaPredicted RBP16.45■□□□□ 0.22
VRK3-207ENST00000594092 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
VRK3-207ENST00000594092 CETN1Q12798 172 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 PTGISQ16647 500 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 KRT39Q6A163 491 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 CACNA2D4Q7Z3S7 1137 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 RSPH3Q86UC2 560 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 EHBP1Q8NDI1 1231 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 ZNF516Q92618 1163 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
VRK3-207ENST00000594092 TRMT1Q9NXH9 659 aaKnown RBP16.45■□□□□ 0.22
VRK3-207ENST00000594092 USP27XA6NNY8 438 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 OFD1O75665 1012 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 MYCP01106 439 aaPredicted RBP16.45■□□□□ 0.22
VRK3-207ENST00000594092 UCHL3P15374 230 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 LMBRD2Q68DH5 695 aaPredicted RBP16.45■□□□□ 0.22
VRK3-207ENST00000594092 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 WDR59Q6PJI9 974 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 SV2AQ7L0J3 742 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 RRAGAQ7L523 313 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 FAM84AQ96KN4 292 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 CGRRF1Q99675 332 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 FBXL5Q9UKA1 691 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 PHF24Q9UPV7 400 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 COQ4Q9Y3A0 265 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 TRPV2Q9Y5S1 764 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 FHOD1Q9Y613 1164 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 CDY2AQ9Y6F7 541 aa16.45■□□□□ 0.22
VRK3-207ENST00000594092 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 SOWAHDA6NJG2 315 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 LRRC53A6NM62 1247 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 RPLP2P05387 115 aaKnown RBP16.44■□□□□ 0.22
VRK3-207ENST00000594092 TNNI1P19237 187 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 OSTNP61366 133 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 NCBP1Q09161 790 aaKnown RBP16.44■□□□□ 0.22
VRK3-207ENST00000594092 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
VRK3-207ENST00000594092 MEA1Q16626 185 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 C15orf39Q6ZRI6 1047 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 TMEM192Q8IY95 271 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 ADPGKQ9BRR6 497 aa16.44■□□□□ 0.22
VRK3-207ENST00000594092 TRMT13Q9NUP7 481 aaKnown RBP16.44■□□□□ 0.22
VRK3-207ENST00000594092 KBTBD13C9JR72 458 aa16.43■□□□□ 0.22
VRK3-207ENST00000594092 M0QZ92 97 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms