RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 ATF7IP2Q5U623 682 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 CRELD2Q6UXH1 353 aaPredicted RBP14.34□□□□□ -0.11
VRK3-205ENST00000593919 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 TMTC1Q8IUR5 882 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 PCSK9Q8NBP7 692 aaKnown RBP14.34□□□□□ -0.11
VRK3-205ENST00000593919 NEK11Q8NG66 645 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 TCHPQ9BT92 498 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 KIAA1586Q9HCI6 787 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 PTPRHQ9HD43 1115 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 LUC7L2Q9Y383 392 aaKnown RBP14.34□□□□□ -0.11
VRK3-205ENST00000593919 A0A1W2PQJ5 194 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 FAM189A1O60320 539 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 NOL4O94818 638 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 LDHAP00338 332 aaKnown RBP14.34□□□□□ -0.11
VRK3-205ENST00000593919 SLC9A1P19634 815 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 MCL1Q07820 350 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 FAM47CQ5HY64 1035 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 LHX8Q68G74 356 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 GDF6Q6KF10 455 aaPredicted RBP14.34□□□□□ -0.11
VRK3-205ENST00000593919 MPZL3Q6UWV2 235 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 GBP6Q6ZN66 633 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 SRGAP1Q7Z6B7 1085 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 ZBTB33Q86T24 672 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 CDR2LQ86X02 465 aaPredicted RBP14.34□□□□□ -0.11
VRK3-205ENST00000593919 CCDC127Q96BQ5 260 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 IQCDQ96DY2 449 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 CDHR5Q9HBB8 845 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 CNTNAP2Q9UHC6 1331 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 TRIP11Q15643 1979 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 LRRIQ3A6PVS8 624 aaPredicted RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 PON1P27169 355 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 CDC42EP1Q00587 391 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 MYL7Q01449 175 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 ZNF568Q3ZCX4 644 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 SEZ6Q53EL9 994 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 EEF1DP3Q658K8 133 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 TMC2Q8TDI7 906 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 POP1Q99575 1024 aaKnown RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 DNAJC7Q99615 494 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 OSMRQ99650 979 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 IRX2Q9BZI1 471 aaPredicted RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 TNFSF13BQ9Y275 285 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 PTPN22Q9Y2R2 807 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 ERLIN2O94905 339 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 DLATP10515 647 aaKnown RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 ACTN1P12814 892 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 FGFR4P22455 802 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 GCLMP48507 274 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 ACLYP53396 1101 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 WNT7BP56706 349 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 ZBED6P86452 979 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 DPY19L2P1Q6NXN4 242 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 MNS1Q8NEH6 495 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 CPB2Q96IY4 423 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 CHP1Q99653 195 aa14.33□□□□□ -0.12
VRK3-205ENST00000593919 CCDC94Q9BW85 323 aaPredicted RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 GCOM2Q9BZD3 368 aaPredicted RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 TOPORSQ9NS56 1045 aaPredicted RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.12
VRK3-205ENST00000593919 OGTO15294 1046 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 TSPAN1O60635 241 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 N4BP1O75113 896 aaKnown RBP14.32□□□□□ -0.12
VRK3-205ENST00000593919 TNFSF9P41273 254 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 MXI1P50539 228 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 ERCC6LQ2NKX8 1250 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 USP37Q86T82 979 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 SESTD1Q86VW0 696 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 OR8K1Q8NGG5 319 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 TMEM40Q8WWA1 233 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 CARD6Q9BX69 1037 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 TMEM117Q9H0C3 514 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 CDT1Q9H211 546 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 GANQ9H2C0 597 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 PDZD7Q9H5P4 517 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 PLCB1Q9NQ66 1216 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 CEP72Q9P209 647 aa14.32□□□□□ -0.12
VRK3-205ENST00000593919 DARSP14868 501 aaKnown RBP14.31□□□□□ -0.12
VRK3-205ENST00000593919 POLR2FP61218 127 aaKnown RBP14.31□□□□□ -0.12
VRK3-205ENST00000593919 ENPEPQ07075 957 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 PSMD6Q15008 389 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
VRK3-205ENST00000593919 CACNA2D4Q7Z3S7 1137 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 NME8Q8N427 588 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 CEP120Q8N960 986 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 ZNF397Q8NF99 534 aaPredicted RBP14.31□□□□□ -0.12
VRK3-205ENST00000593919 BAP1Q92560 729 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.31□□□□□ -0.12
VRK3-205ENST00000593919 PDE11AQ9HCR9 933 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 SIX2Q9NPC8 291 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 NLRC4Q9NPP4 1024 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 MOXD2PA6NHM9 499 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 P4HA2O15460 535 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 KIF5CO60282 957 aa14.31□□□□□ -0.12
VRK3-205ENST00000593919 CABYRO75952 493 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms