RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 TCF7P36402 384 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 DCTP40126 519 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 GLUD2P49448 558 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 GFPT1Q06210 699 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 SMAD1Q15797 465 aaKnown RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 KIZQ2M2Z5 673 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 PPM1LQ5SGD2 360 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 AGMOQ6ZNB7 445 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 GLRX5Q86SX6 157 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 ZNF598Q86UK7 904 aaKnown RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 ERICH1Q86X53 443 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 SYT12Q8IV01 421 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 GPIHBP1Q8IV16 184 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 ZNF444Q8N0Y2 327 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 CAMKK1Q8N5S9 505 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 DEFB119Q8N690 84 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 SPDYE1Q8NFV5 336 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 FAM200AQ8TCP9 573 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 CSGALNACT1Q8TDX6 532 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 SETD7Q8WTS6 366 aaKnown RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 HDAC7Q8WUI4 952 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 RLN3Q8WXF3 142 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 FGF11Q92914 225 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 RSPRY1Q96DX4 576 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 TCEAL4Q96EI5 215 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 TMEM176AQ96HP8 235 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 ZFYVE19Q96K21 471 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 ZNF668Q96K58 619 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 ZNF512BQ96KM6 892 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 DNAJC2Q99543 621 aaKnown RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 KIF2CQ99661 725 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 PDCD2LQ9BRP1 358 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 HERC2P3Q9BVR0 1158 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 MRPL9Q9BYD2 267 aaKnown RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 RXFP1Q9HBX9 757 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 CAPN10Q9HC96 672 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 ZFP14Q9HCL3 533 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 TRPV5Q9NQA5 729 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 STARD5Q9NSY2 213 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 MARCH5Q9NX47 278 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 SNTG2Q9NY99 539 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 GTSE1Q9NYZ3 720 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 DPP7Q9UHL4 492 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 CIZ1Q9ULV3 898 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 SLC6A14Q9UN76 642 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 STX8Q9UNK0 236 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 PRG3Q9Y2Y8 225 aaPredicted RBP3.55□□□□□ -1.84
VRK3-204ENST00000593912 SLC4A4Q9Y6R1 1079 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 PCSK5Q92824 1860 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 SDK2Q58EX2 2172 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 PLIN4Q96Q06 1357 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ZMYM6O95789 1325 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 WDR19Q8NEZ3 1342 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ARHGAP33O14559 1287 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ZNF862O60290 1169 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 IGSF3O75054 1194 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 APBB3O95704 486 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 RHOP08100 348 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 TSPY3P0CV98 308 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 TSPY8P0CW00 308 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ITGB6P18564 788 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 AFF1P51825 1210 aaKnown RBP3.54□□□□□ -1.84
VRK3-204ENST00000593912 FOXK1P85037 733 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 DSG1Q02413 1049 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 VAC14Q08AM6 782 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 NBR1Q14596 966 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 PGM5Q15124 567 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 DUOXA1Q1HG43 343 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 USP39Q53GS9 565 aaKnown RBP3.54□□□□□ -1.84
VRK3-204ENST00000593912 NOMO2Q5JPE7 1267 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 RRP12Q5JTH9 1297 aaKnown RBP3.54□□□□□ -1.84
VRK3-204ENST00000593912 LIN9Q5TKA1 542 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 LYSMD4Q5XG99 296 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ANO7Q6IWH7 933 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 FSTL4Q6MZW2 842 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ZNF746Q6NUN9 644 aaPredicted RBP3.54□□□□□ -1.84
VRK3-204ENST00000593912 KCNV1Q6PIU1 500 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 PRSS55Q6UWB4 352 aaPredicted RBP3.54□□□□□ -1.84
VRK3-204ENST00000593912 METTL7BQ6UX53 244 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 BTNL9Q6UXG8 535 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 WWC1Q8IX03 1113 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 SLC7A14Q8TBB6 771 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 BAHD1Q8TBE0 780 aaPredicted RBP3.54□□□□□ -1.84
VRK3-204ENST00000593912 HIC2Q96JB3 615 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ZSWIM3Q96MP5 696 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ASB16Q96NS5 453 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 FNBP1Q96RU3 617 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 GAD1Q99259 594 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 MEIS3Q99687 375 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 APOL6Q9BWW8 343 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 EPN3Q9H201 632 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 C8orf33Q9H7E9 229 aaPredicted RBP3.54□□□□□ -1.84
VRK3-204ENST00000593912 IL21RQ9HBE5 538 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 GDE1Q9NZC3 331 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 FBXW11Q9UKB1 542 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 PILRBQ9UKJ0 227 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 SYNPO2Q9UMS6 1093 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 BTBD3Q9Y2F9 522 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 PCDHA2Q9Y5H9 948 aa3.54□□□□□ -1.84
VRK3-204ENST00000593912 ABCB11O95342 1321 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms