RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 KCNN1Q92952 543 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 CDT1Q9H211 546 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 CD320Q9NPF0 282 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 LARSQ9P2J5 1176 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 GDAQ9Y2T3 454 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 FSD2A1L4K1 749 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 LILRB3O75022 631 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 CLASP2O75122 1294 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 NCKAP1LP55160 1127 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 SMAD4Q13485 552 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 NAB2Q15742 525 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 TAS1R1Q7RTX1 841 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 RNF168Q8IYW5 571 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 CEP120Q8N960 986 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 RPS6KC1Q96S38 1066 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 CACNG4Q9UBN1 327 aa20.3■□□□□ 0.84
SHKBP1-202ENST00000593764 A0A087X0B3 334 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 BRD1O95696 1058 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 BMS1Q14692 1282 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 PTPN14Q15678 1187 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 SMAD2Q15796 467 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 RABGGTAQ92696 567 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 ZBTB45Q96K62 511 aaPredicted RBP20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 FIZ1Q96SL8 496 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 PAAF1Q9BRP4 392 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 STK17AQ9UEE5 414 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 STK39Q9UEW8 545 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 CCDC39Q9UFE4 941 aa20.29■□□□□ 0.84
SHKBP1-202ENST00000593764 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 F13A1P00488 732 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 SOD2P04179 222 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 THP07101 528 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 GRM5P41594 1212 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 STRN3Q13033 797 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 STK38Q15208 465 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 ZNF568Q3ZCX4 644 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 RRAGBQ5VZM2 374 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 LLGL2Q6P1M3 1020 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 ALKAL1Q6UXT8 129 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 HAUS6Q7Z4H7 955 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 APBB1IPQ7Z5R6 666 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 ZBTB33Q86T24 672 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 MYCT1Q8N699 235 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 ZNF396Q96N95 335 aaPredicted RBP20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 COLEC11Q9BWP8 271 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 PARVGQ9HBI0 331 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 FAM50BQ9Y247 325 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 HCFC2Q9Y5Z7 792 aa20.28■□□□□ 0.84
SHKBP1-202ENST00000593764 SPTLC2O15270 562 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 PPP6R2O75170 966 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 NR1I2O75469 434 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 FAM13AO94988 1023 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 MCF2P10911 925 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 CA8P35219 290 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 TUSC3Q13454 348 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 XKR4Q5GH76 650 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 ANKRD54Q6NXT1 300 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 SYCE2Q6PIF2 218 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 MPZL3Q6UWV2 235 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 PPP1R10Q96QC0 940 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 HERC2P3Q9BVR0 1158 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 GPR62Q9BZJ7 368 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 S1PR5Q9H228 398 aa20.27■□□□□ 0.84
SHKBP1-202ENST00000593764 TRIP11Q15643 1979 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 MYH15Q9Y2K3 1946 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 H0YCG3 227 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 MEFVO15553 781 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 TRAK2O60296 914 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 TOM1L1O75674 476 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 YEATS4O95619 227 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 TXLNAP40222 546 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 ZP2Q05996 745 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 FOXD4L6Q3SYB3 417 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 KIAA0319Q5VV43 1072 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 FOXD4L3Q6VB84 417 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 ZPBP2Q6X784 338 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 SLC22A17Q8WUG5 538 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 TCHPQ9BT92 498 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 HAPLN2Q9GZV7 340 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 CHST7Q9NS84 486 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 PRKAG3Q9UGI9 489 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 ADAM28Q9UKQ2 775 aa20.26■□□□□ 0.83
SHKBP1-202ENST00000593764 CASTOR2A6NHX0 329 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 MYMKA6NI61 221 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 KRT18P05783 430 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 CNPP09543 421 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 OSTNP61366 133 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 MCL1Q07820 350 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 HSP90AA2PQ14568 343 aaPredicted RBP20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 GLRA4Q5JXX5 417 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 FUT10Q6P4F1 479 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 CCDC73Q6ZRK6 1079 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 DYMQ7RTS9 669 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 ADHFE1Q8IWW8 467 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 GJD3Q8N144 294 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 SUSD6Q92537 303 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 DDX12PQ92771 950 aa20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 KHSRPQ92945 711 aaKnown RBP eCLIP20.25■□□□□ 0.83
SHKBP1-202ENST00000593764 DNAJC19Q96DA6 116 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms