RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 DDX1Q92499 740 aaKnown RBP11.3□□□□□ -0.6
SMCO4P1-201ENST00000592909 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
SMCO4P1-201ENST00000592909 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
SMCO4P1-201ENST00000592909 CHRDQ9H2X0 955 aa11.3□□□□□ -0.6
SMCO4P1-201ENST00000592909 SEMA4GQ9NTN9 838 aa11.3□□□□□ -0.6
SMCO4P1-201ENST00000592909 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
SMCO4P1-201ENST00000592909 COL4A3Q01955 1670 aa11.3□□□□□ -0.6
SMCO4P1-201ENST00000592909 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 CCL16O15467 120 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 FOXD2O60548 495 aaPredicted RBP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 TSPAN1O60635 241 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 DKC1O60832 514 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PMLP29590 882 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PTENP60484 403 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 NCBP1Q09161 790 aaKnown RBP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 GRIK3Q13003 919 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PPP2R5DQ14738 602 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 CSRP2Q16527 193 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 LPAL2Q16609 132 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PABPC1LQ4VXU2 614 aaKnown RBP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PRR23CQ6ZRP0 262 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 FERMT3Q86UX7 667 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 HACE1Q8IYU2 909 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 LNX1Q8TBB1 728 aaPredicted RBP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 ETNPPLQ8TBG4 499 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 TCP11Q8WWU5 503 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PIK3R5Q8WYR1 880 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 CEP170P1Q96L14 293 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 C22orf23Q9BZE7 217 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PLA2G2FQ9BZM2 168 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 HEBP1Q9NRV9 189 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 GDE1Q9NZC3 331 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 ANGPTL2Q9UKU9 493 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 POLIQ9UNA4 740 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 SF3B1O75533 1304 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
SMCO4P1-201ENST00000592909 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 EML1O00423 815 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 CCR3P51677 355 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 SHC2P98077 582 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 POU5F1BQ06416 359 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 DMWDQ09019 674 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 RAB33AQ14088 237 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 MOXD1Q6UVY6 613 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 TBCKQ8TEA7 893 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 RABGGTAQ92696 567 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 APOL6Q9BWW8 343 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 NXF3Q9H4D5 531 aaKnown RBP11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 HCFC1R1Q9NWW0 138 aa11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 MTCL1Q9Y4B5 1905 aaKnown RBP11.28□□□□□ -0.6
SMCO4P1-201ENST00000592909 DOCK6Q96HP0 2047 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 ADAM12O43184 909 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 TDP2O95551 362 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 P4HBP07237 508 aaKnown RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 AKAP5P24588 427 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 CNR2P34972 360 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 PPP2R5CQ13362 524 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 TUSC3Q13454 348 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 SIM2Q14190 667 aaPredicted RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 MXD4Q14582 209 aaPredicted RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 EMC2Q15006 297 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 PSMD5Q16401 504 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 AMHR2Q16671 573 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 TANGO2Q6ICL3 276 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 PDXDC1Q6P996 788 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 PRR23BQ6ZRT6 265 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 SLC7A14Q8TBB6 771 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 MCRS1Q96EZ8 462 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 CPB2Q96IY4 423 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 PAAF1Q9BRP4 392 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 RNF26Q9BY78 433 aaPredicted RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 TRPV5Q9NQA5 729 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 SH3GLB2Q9NR46 395 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 NID2Q14112 1375 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 WDR81Q562E7 1941 aa11.27□□□□□ -0.61
SMCO4P1-201ENST00000592909 INO80B-WBP1J3KQ70 363 aa11.26□□□□□ -0.61
SMCO4P1-201ENST00000592909 HRO43593 1189 aa11.26□□□□□ -0.61
SMCO4P1-201ENST00000592909 GDF9O60383 454 aa11.26□□□□□ -0.61
SMCO4P1-201ENST00000592909 RHOP08100 348 aa11.26□□□□□ -0.61
SMCO4P1-201ENST00000592909 ARF4P18085 180 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms