RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 FAM213AQ9BRX8 229 aa17.82■□□□□ 0.44
PRKCSH-217ENST00000592741 NUP85Q9BW27 656 aa17.82■□□□□ 0.44
PRKCSH-217ENST00000592741 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
PRKCSH-217ENST00000592741 GTF3C4Q9UKN8 822 aa17.82■□□□□ 0.44
PRKCSH-217ENST00000592741 NR2E1Q9Y466 385 aa17.82■□□□□ 0.44
PRKCSH-217ENST00000592741 TELO2Q9Y4R8 837 aa17.82■□□□□ 0.44
PRKCSH-217ENST00000592741 ZNF541Q9H0D2 1346 aa17.82■□□□□ 0.44
PRKCSH-217ENST00000592741 FAM187AA6NFU0 413 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 HMGB1P1B2RPK0 211 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 SORBS3O60504 671 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 ZC3H11AO75152 810 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 LIG4P49917 911 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 DHX34Q14147 1143 aaKnown RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 DNAJC21Q5F1R6 531 aaKnown RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 ADAT2Q7Z6V5 191 aaKnown RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 SH2D3CQ8N5H7 860 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 ATP6V1G3Q96LB4 118 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 TRIM51Q9BSJ1 452 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 DPH5Q9H2P9 285 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 KIAA1586Q9HCI6 787 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 ACP6Q9NPH0 428 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 UVRAGQ9P2Y5 699 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 ATMINO43313 823 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 EXTL3O43909 919 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 GGPS1O95749 300 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 GCNT1Q02742 428 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 EMC2Q15006 297 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 NOL9Q5SY16 702 aaKnown RBP17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 FOXR1Q6PIV2 292 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 KDM7AQ6ZMT4 941 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 TAS1R3Q7RTX0 852 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 KRT35Q92764 455 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 RASAL2Q9UJF2 1139 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 PPP2R3BQ9Y5P8 575 aa17.81■□□□□ 0.44
PRKCSH-217ENST00000592741 LOC285556D6RIA3 1793 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 EIF3HO15372 352 aaKnown RBP eCLIP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 PHF2O75151 1096 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 KRT5P13647 590 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 STRN3Q13033 797 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 STXBP2Q15833 593 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 UAP1Q16222 522 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 TATDN2Q93075 761 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 TMBIM4Q9HC24 238 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 ERVK-5Q9HDB9 667 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 C1orf112Q9NSG2 853 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 KIAA0391O15091 583 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 SPOPO43791 374 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 CTNNA1P35221 906 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 ACAD10Q6JQN1 1059 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 TRPM4Q8TD43 1214 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 UBLCP1Q8WVY7 318 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 DDX1Q92499 740 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 DHX38Q92620 1227 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 ZNF302Q9NR11 478 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 GGA3Q9NZ52 723 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 CHORDC1Q9UHD1 332 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 AFG3L2Q9Y4W6 797 aa17.8■□□□□ 0.44
PRKCSH-217ENST00000592741 GRIN2DO15399 1336 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 MYZAPP0CAP1 466 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 NR1D1P20393 614 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 SCP2P22307 547 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 CTNNA2P26232 953 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 CHRNA3P32297 505 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 ICAM3P32942 547 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 MARCKSL1P49006 195 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 TMC3Q7Z5M5 1100 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 CHST13Q8NET6 341 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 DNERQ8NFT8 737 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 ATP8B4Q8TF62 1192 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 CD101Q93033 1021 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 FNBP1Q96RU3 617 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 ERP44Q9BS26 406 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 TRIM31Q9BZY9 425 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 RSPH14Q9UHP6 348 aa17.79■□□□□ 0.44
PRKCSH-217ENST00000592741 H0YGN5 161 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 ERLIN2O94905 339 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 OATP04181 439 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 COPB2P35606 906 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 FLT3P36888 993 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 PEX5P50542 639 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 PSMD6Q15008 389 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 CLEC16AQ2KHT3 1053 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 WDR44Q5JSH3 913 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 DUPD1Q68J44 220 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 AADACL2Q6P093 401 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 C15orf39Q6ZRI6 1047 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 CYFIP1Q7L576 1253 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 FMO2Q99518 471 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 PI4K2AQ9BTU6 479 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 MAFBQ9Y5Q3 323 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 NFS1Q9Y697 457 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 LCTP09848 1927 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 MYH9P35579 1960 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 ATP1A2P50993 1020 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 SP2Q02086 613 aa17.78■□□□□ 0.44
PRKCSH-217ENST00000592741 EMC10Q5UCC4 262 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms