RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 DSG1Q02413 1049 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 TUSC3Q13454 348 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 USP41Q3LFD5 358 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 ATAT1Q5SQI0 421 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 EEF1DP3Q658K8 133 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 KIAA1841Q6NSI8 718 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 FBXL18Q96ME1 805 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 PNMA5Q96PV4 448 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 ACO2Q99798 780 aaKnown RBP10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 RUSC1Q9BVN2 902 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 APOL5Q9BWW9 433 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 MRPL4Q9BYD3 311 aaKnown RBP10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 GPR62Q9BZJ7 368 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 KMT5AQ9NQR1 393 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 ARHGAP28Q9P2N2 729 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 DPP7Q9UHL4 492 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 MUTYHQ9UIF7 546 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 ADAM28Q9UKQ2 775 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 NR2E1Q9Y466 385 aa10.67□□□□□ -0.7
PRKCSH-215ENST00000592435 SFI1A8K8P3 1242 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 F8W810 466 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 C2CD2LO14523 706 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 TEX28O15482 410 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 PLA2G4BP0C869 781 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 PLS3P13797 630 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 LONP1P36776 959 aaKnown RBP10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 UBA7P41226 1012 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 SMTNP53814 917 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 HSP90AA2PQ14568 343 aaPredicted RBP10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 ZRSR1Q15695 479 aaKnown RBP10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 NAB2Q15742 525 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 TMEM119Q4V9L6 283 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 RARS2Q5T160 578 aaKnown RBP10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 FUT10Q6P4F1 479 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 ELMSAN1Q6PJG2 1045 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 CYP26C1Q6V0L0 522 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 C12orf76Q8N812 135 aaPredicted RBP10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 HDAC7Q8WUI4 952 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 INTS4Q96HW7 963 aaKnown RBP10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 POMKQ9H5K3 350 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 SFXN1Q9H9B4 322 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 PTPRHQ9HD43 1115 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 FNIP2Q9P278 1114 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 GDAQ9Y2T3 454 aa10.66□□□□□ -0.7
PRKCSH-215ENST00000592435 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 BRD1O95696 1058 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 PROZP22891 400 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 GRM5P41594 1212 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 ZXDAP98168 799 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 CREMQ03060 361 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 SF3A1Q15459 793 aaKnown RBP10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 ARSHQ5FYA8 562 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 XKR4Q5GH76 650 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 KANK3Q6NY19 840 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 ALKAL1Q6UXT8 129 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 TMC5Q6UXY8 1006 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 C15orf39Q6ZRI6 1047 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 TAS1R3Q7RTX0 852 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 BMP8AQ7Z5Y6 402 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 GPR149Q86SP6 731 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 PLCD3Q8N3E9 789 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 TMEM161BQ8NDZ6 487 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 RABGGTAQ92696 567 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 KCNN1Q92952 543 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 CALML4Q96GE6 196 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 PLIN2Q99541 437 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 PAAF1Q9BRP4 392 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 CCDC94Q9BW85 323 aaPredicted RBP10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 TARS2Q9BW92 718 aaKnown RBP10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 RHOBTB2Q9BYZ6 727 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 CXCL16Q9H2A7 254 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 PLEKHA4Q9H4M7 779 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 TOPORSQ9NS56 1045 aaPredicted RBP10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 LARSQ9P2J5 1176 aaKnown RBP10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 RAPGEFL1Q9UHV5 662 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 ODF2LQ9ULJ1 636 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 USTQ9Y2C2 406 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
PRKCSH-215ENST00000592435 VPS37CA5D8V6 355 aaPredicted RBP10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 H0YCG3 227 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 SLC16A4O15374 487 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 PAPLNO95428 1278 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 GLUD1P00367 558 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 MCF2P10911 925 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 SYT1P21579 422 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 SCP2P22307 547 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 YARSP54577 528 aaKnown RBP10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 RAD51AP2Q09MP3 1159 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 STRN3Q13033 797 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 ZNF568Q3ZCX4 644 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 LILRA6Q6PI73 481 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 DCLRE1AQ6PJP8 1040 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 MPZL3Q6UWV2 235 aa10.64□□□□□ -0.71
PRKCSH-215ENST00000592435 ZPBP2Q6X784 338 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms