RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 CCDC94Q9BW85 323 aaPredicted RBP10.63□□□□□ -0.71
TPM4-215ENST00000592138 FGFBP2Q9BYJ0 223 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
TPM4-215ENST00000592138 SEMA6BQ9H3T3 888 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 CWH43Q9H720 699 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 TOPORSQ9NS56 1045 aaPredicted RBP10.63□□□□□ -0.71
TPM4-215ENST00000592138 TBC1D7Q9P0N9 293 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 ANKFY1Q9P2R3 1169 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 USP20Q9Y2K6 914 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 HES2Q9Y543 173 aa10.63□□□□□ -0.71
TPM4-215ENST00000592138 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.63□□□□□ -0.71
TPM4-215ENST00000592138 MRPL42Q9Y6G3 142 aaKnown RBP10.63□□□□□ -0.71
TPM4-215ENST00000592138 TRANK1O15050 2925 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 OGTO15294 1046 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 PRPF6O94906 941 aaKnown RBP10.62□□□□□ -0.71
TPM4-215ENST00000592138 AKAP5P24588 427 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 BMPR1AP36894 532 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 MLH1P40692 756 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 GATMP50440 423 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 YARSP54577 528 aaKnown RBP10.62□□□□□ -0.71
TPM4-215ENST00000592138 KCNA1Q09470 495 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 GRIK3Q13003 919 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 STK4Q13043 487 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 PNOCQ13519 176 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 HSP90AA2PQ14568 343 aaPredicted RBP10.62□□□□□ -0.71
TPM4-215ENST00000592138 TPRNQ4KMQ1 711 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 PAN2Q504Q3 1202 aaKnown RBP10.62□□□□□ -0.71
TPM4-215ENST00000592138 EPC2Q52LR7 807 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 ALKAL1Q6UXT8 129 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 LRRC55Q6ZSA7 311 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 C12orf56Q8IXR9 622 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 TMEM192Q8IY95 271 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 GSTCDQ8NEC7 633 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 GOLGA5Q8TBA6 731 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 HPS3Q969F9 1004 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 ZBTB45Q96K62 511 aaPredicted RBP10.62□□□□□ -0.71
TPM4-215ENST00000592138 ACAP3Q96P50 834 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 TMEM175Q9BSA9 504 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 HAPLN2Q9GZV7 340 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 GBP3Q9H0R5 595 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 PLEKHA5Q9HAU0 1116 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 SLC39A2Q9NP94 309 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 TYW1Q9NV66 732 aaKnown RBP10.62□□□□□ -0.71
TPM4-215ENST00000592138 TBC1D13Q9NVG8 400 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 SNTG2Q9NY99 539 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 CNTN3Q9P232 1028 aa10.62□□□□□ -0.71
TPM4-215ENST00000592138 XIRP2A4UGR9 3374 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 ANKRD63C9JTQ0 380 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 LDHAP00338 332 aaKnown RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 ADRB2P07550 413 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 CLTAP09496 248 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 KCNE1P15382 129 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 IBSPP21815 317 aaPredicted RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 ADSSP30520 456 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 HOXD13P35453 343 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 PPM1AP35813 382 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 MATR3P43243 847 aaKnown RBP eCLIP10.61□□□□□ -0.71
TPM4-215ENST00000592138 DSC1Q08554 894 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 KNOP1Q1ED39 458 aaKnown RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 ZNF658Q5TYW1 1059 aaPredicted RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 HS2ST1Q7LGA3 356 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 ZBTB33Q86T24 672 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 CD302Q8IX05 232 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 GUF1Q8N442 669 aaKnown RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 CEP120Q8N960 986 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 GLIS3Q8NEA6 775 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 POMGNT1Q8WZA1 660 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 SMARCE1Q969G3 411 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 SNX27Q96L92 541 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 ZFP42Q96MM3 310 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 RPS6KC1Q96S38 1066 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 GAD1Q99259 594 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 C17orf80Q9BSJ5 609 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 C11orf84Q9BUA3 381 aaPredicted RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 MSTO1Q9BUK6 570 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 APOL6Q9BWW8 343 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 STK39Q9UEW8 545 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 PARP2Q9UGN5 583 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 CPSF3Q9UKF6 684 aaKnown RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 AGO2Q9UKV8 859 aaKnown RBP10.61□□□□□ -0.71
TPM4-215ENST00000592138 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 PCDHA5Q9Y5H7 936 aa10.61□□□□□ -0.71
TPM4-215ENST00000592138 MYH11P35749 1972 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 H3BNC9 293 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 PDXKO00764 312 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 PTGESO14684 152 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 TGFB1I1O43294 461 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 MBD3O95983 291 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 THP07101 528 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 POU3F3P20264 500 aaPredicted RBP10.6□□□□□ -0.71
TPM4-215ENST00000592138 CTNNB1P35222 781 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 PPP1R2P41236 205 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 SCNN1GP51170 649 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 AFF1P51825 1210 aaKnown RBP10.6□□□□□ -0.71
TPM4-215ENST00000592138 PLCB3Q01970 1234 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 UBE3AQ05086 875 aa10.6□□□□□ -0.71
TPM4-215ENST00000592138 RNASELQ05823 741 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms