RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 USP41Q3LFD5 358 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 ZNF528Q3MIS6 628 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 ELMSAN1Q6PJG2 1045 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 SRGAP1Q7Z6B7 1085 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 ZBTB44Q8NCP5 570 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 RDM1Q8NG50 284 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 HDAC7Q8WUI4 952 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 SHDQ96IW2 340 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 MBOAT7Q96N66 472 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 CLSTN3Q9BQT9 956 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 COLEC11Q9BWP8 271 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 DHX33Q9H6R0 707 aaKnown RBP10.94□□□□□ -0.66
RETREG3-211ENST00000591547 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
RETREG3-211ENST00000591547 FNIP2Q9P278 1114 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 DPP7Q9UHL4 492 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 FBXO4Q9UKT5 387 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 CDV3Q9UKY7 258 aaKnown RBP10.94□□□□□ -0.66
RETREG3-211ENST00000591547 LIMCH1Q9UPQ0 1083 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 MAP1BP46821 2468 aaKnown RBP10.94□□□□□ -0.66
RETREG3-211ENST00000591547 VWA8A3KMH1 1905 aa10.94□□□□□ -0.66
RETREG3-211ENST00000591547 ACACBO00763 2458 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 TPRP12270 2363 aaKnown RBP10.93□□□□□ -0.66
RETREG3-211ENST00000591547 NRG2O14511 850 aaPredicted RBP10.93□□□□□ -0.66
RETREG3-211ENST00000591547 CPLX1O14810 134 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 SPTLC1O15269 473 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 B4GALT5O43286 388 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 LILRB5O75023 590 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 TADA2AO75478 443 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 IFNAR1P17181 557 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 MCM2P49736 904 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 SPEM2Q0P670 501 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 FZD5Q13467 585 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 CPLX2Q6PUV4 134 aaKnown RBP10.93□□□□□ -0.66
RETREG3-211ENST00000591547 TPRG1Q6ZUI0 275 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 FERMT3Q86UX7 667 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 CEP57Q86XR8 500 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 CCDC83Q8IWF9 413 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 NECAB1Q8N987 351 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 BICD2Q8TD16 824 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 PSPC1Q8WXF1 523 aaKnown RBP10.93□□□□□ -0.66
RETREG3-211ENST00000591547 SLC7A3Q8WY07 619 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 AIFM3Q96NN9 605 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 RNF26Q9BY78 433 aaPredicted RBP10.93□□□□□ -0.66
RETREG3-211ENST00000591547 EPC1Q9H2F5 836 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 ZSCAN32Q9NX65 697 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 RGL1Q9NZL6 768 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 FBXW11Q9UKB1 542 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 ADAM28Q9UKQ2 775 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 VAV3Q9UKW4 847 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 PCDHGA2Q9Y5H1 932 aa10.93□□□□□ -0.66
RETREG3-211ENST00000591547 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.93□□□□□ -0.66
RETREG3-211ENST00000591547 CYP3A7-CYP3A51PA0A087WV96 503 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 A0A087WWV3 80 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 CASTOR2A6NHX0 329 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 CDKL5O76039 1030 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 ERLIN2O94905 339 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 NPTXRO95502 500 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 C8AP07357 584 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 CYP3A7P24462 503 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 HOXC13P31276 330 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 QARSP47897 775 aaKnown RBP10.92□□□□□ -0.66
RETREG3-211ENST00000591547 AKAP17AQ02040 695 aaKnown RBP10.92□□□□□ -0.66
RETREG3-211ENST00000591547 PRKCQQ04759 706 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 MTAPQ13126 283 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 EMC2Q15006 297 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 AMHR2Q16671 573 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 PPM1LQ5SGD2 360 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 FAM171A1Q5VUB5 890 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 CNNM3Q8NE01 707 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 NSUN7Q8NE18 718 aaKnown RBP10.92□□□□□ -0.66
RETREG3-211ENST00000591547 CCDC148Q8NFR7 591 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 LNX1Q8TBB1 728 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-211ENST00000591547 ASAP3Q8TDY4 903 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 NELL1Q92832 810 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 MCRS1Q96EZ8 462 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
RETREG3-211ENST00000591547 PHF20Q9BVI0 1012 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 CSRNP2Q9H175 543 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 XPNPEP1Q9NQW7 623 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 HEBP1Q9NRV9 189 aa10.92□□□□□ -0.66
RETREG3-211ENST00000591547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.92□□□□□ -0.66
RETREG3-211ENST00000591547 DNMT3BQ9UBC3 853 aaKnown RBP10.92□□□□□ -0.66
RETREG3-211ENST00000591547 INO80B-WBP1J3KQ70 363 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 M0R2N6 131 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 NR1I2O75469 434 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 KIF4AO95239 1232 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 CTDNEP1O95476 244 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 ADRB1P08588 477 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 ARF4P18085 180 aaPredicted RBP10.91□□□□□ -0.66
RETREG3-211ENST00000591547 PTENP60484 403 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 LMNB2Q03252 620 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 MBTD1Q05BQ5 628 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 CTTNQ14247 550 aaKnown RBP10.91□□□□□ -0.66
RETREG3-211ENST00000591547 HSP90AA2PQ14568 343 aaPredicted RBP10.91□□□□□ -0.66
RETREG3-211ENST00000591547 NPY5RQ15761 445 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 PSMD5Q16401 504 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 INF2Q27J81 1249 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 XKR9Q5GH70 373 aa10.91□□□□□ -0.66
RETREG3-211ENST00000591547 PPM1JQ5JR12 505 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms