RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 MOSPD1Q9UJG1 213 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 ADGRB2O60241 1585 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 M0QYV0 167 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 GYG2O15488 501 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 HSPA4LO95757 839 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 SMARCA1P28370 1054 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 GRAMD1AQ96CP6 724 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 EHD2Q9NZN4 543 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 ZRANB2O95218 330 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 EEF1DP29692 281 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 TRIP13Q15645 432 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 GRAMD1BQ3KR37 738 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 PPP6R3Q5H9R7 873 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 BTBD8Q5XKL5 378 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 MYLK4Q86YV6 388 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 TRIML2Q8N7C3 387 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 FBXL13Q8NEE6 735 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 SLC38A7Q9NVC3 462 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 ITGA4P13612 1032 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 PMLP29590 882 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 FAM117BQ6P1L5 589 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 KSR1Q8IVT5 923 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 APOBEC2Q9Y235 224 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 FOXP2O15409 715 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 STAG3L1P0CL83 205 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 BACE1P56817 501 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 TMPRSS15P98073 1019 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 SPATA2LQ8IUW3 424 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 SAAL1Q96ER3 474 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 POLD4Q9HCU8 107 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 ADGRG1Q9Y653 693 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 RASA4BC9J798 803 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 NVLO15381 856 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 RASA4O43374 803 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 DRP2Q13474 957 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 KIAA1755Q5JYT7 1200 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 DCLK2Q8N568 766 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 CYP26B1Q9NR63 512 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 CNOT8Q9UFF9 292 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 MORC2Q9Y6X9 1032 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 SLC26A4O43511 780 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 CYBBP04839 570 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 GGCXP38435 758 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 PAPOLAP51003 745 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 PMS2P54278 862 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 MAP1SQ66K74 1059 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 TRIM67Q6ZTA4 783 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 GPC2Q8N158 579 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 PCSK9Q8NBP7 692 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 FAF2Q96CS3 445 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 FGD4Q96M96 766 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 MAP3K14Q99558 947 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 RIT2Q99578 217 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 MXRA8Q9BRK3 442 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 ZWILCHQ9H900 591 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 MAGED2Q9UNF1 606 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 SNX24Q9Y343 169 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 EEF1B2P24534 225 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 GUF1Q8N442 669 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 OSBPL9Q96SU4 736 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 ZBTB18Q99592 522 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.11□□□□□ -0.152e-7■■■□□ 15.5
SMARCA4-216ENST00000591545 SUN2Q9UH99 717 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 TRIM33Q9UPN9 1127 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 LRRC53A6NM62 1247 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 MYBL1P10243 752 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 ADORA2BP29275 332 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 ATP2C1P98194 919 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 TMTC4Q5T4D3 741 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 EPM2AIP1Q7L775 607 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 SCG3Q8WXD2 468 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 HSPH1Q92598 858 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 TAF1DQ9H5J8 278 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 RGL1Q9NZL6 768 aa14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 PPARGC1AQ9UBK2 798 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 LSM7Q9UK45 103 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-216ENST00000591545 HAUS5O94927 633 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 RBP5P82980 135 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 ACAD11Q709F0 780 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 ARHGAP18Q8N392 663 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 AGBL1Q96MI9 1066 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 KRT82Q9NSB4 513 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 ZFP69BQ9UJL9 534 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 ANAPC7Q9UJX3 599 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 RICTORQ6R327 1708 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 KRT17Q04695 432 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 KCNH2Q12809 1159 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 GPRASP2Q96D09 838 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 MOV10L1Q9BXT6 1211 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 NDE1Q9NXR1 346 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 TNS2Q63HR2 1409 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 DYNC1I2Q13409 638 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 TMEM143Q96AN5 459 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 ATP6V1G3Q96LB4 118 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 MRFAP1Q9Y605 127 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 C17orf102A2RUQ5 167 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 WDR91A4D1P6 747 aa14.1□□□□□ -0.15
SMARCA4-216ENST00000591545 POLRMTO00411 1230 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms