RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SELPP16109 830 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 MUTP22033 750 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 GRNP28799 593 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 ST13P50502 369 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 DRP2Q13474 957 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 TARBP2Q15633 366 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 TRIM71Q2Q1W2 868 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 HYIQ5T013 277 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 ZNF618Q5T7W0 954 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 NXPE4Q6UWF7 544 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 LRRC69Q6ZNQ3 347 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 DEFB128Q7Z7B8 93 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 RHPN2Q8IUC4 686 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 LINC00528Q8N1L1 170 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 MCPH1Q8NEM0 835 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 LRRC15Q8TF66 581 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 TCP11Q8WWU5 503 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 PSPC1Q8WXF1 523 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 LARP4BQ92615 738 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 HPS1Q92902 700 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 BADQ92934 168 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 OSMRQ99650 979 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 CCSER1Q9C0I3 900 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 GOLPH3LQ9H4A5 285 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 ZHX3Q9H4I2 956 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 DHX33Q9H6R0 707 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 GPRC5CQ9NQ84 441 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 XPNPEP1Q9NQW7 623 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 SUCLA2Q9P2R7 463 aaPredicted RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 PPME1Q9Y570 386 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 PCDHA2Q9Y5H9 948 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 COL4A3BPQ9Y5P4 624 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 TRPV2Q9Y5S1 764 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 NPHP3-ACAD11A0A0J9YXS1 232 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 RSPH10B2B2RC85 870 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 GOLGA6L22H0YM25 854 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 POLR2DO15514 142 aaKnown RBP7.07□□□□□ -1.28
VPS4B-205ENST00000591383 HIP1RO75146 1068 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 CAND2O75155 1236 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 TIMP1P01033 207 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 RPLP2P05387 115 aaKnown RBP7.07□□□□□ -1.28
VPS4B-205ENST00000591383 RSPH10BP0C881 870 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 LIG1P18858 919 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 ITGB8P26012 769 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 MAGEA10P43363 369 aaPredicted RBP7.07□□□□□ -1.28
VPS4B-205ENST00000591383 SYKP43405 635 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 NDUFA8P51970 172 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 SLC12A3P55017 1021 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 NLRP11P59045 1033 aaKnown RBP7.07□□□□□ -1.28
VPS4B-205ENST00000591383 ADAM17P78536 824 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 FPGSQ05932 587 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 PAK2Q13177 524 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 ARSJQ5FYB0 599 aaPredicted RBP7.07□□□□□ -1.28
VPS4B-205ENST00000591383 WDR44Q5JSH3 913 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 PRICKLE2Q7Z3G6 844 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 KSR1Q8IVT5 923 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 SPNS2Q8IVW8 549 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 EXOC8Q8IYI6 725 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 GRAMD1CQ8IYS0 662 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 CEP57L1Q8IYX8 460 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 KIAA0319LQ8IZA0 1049 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 TMEM199Q8N511 208 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 LINC01465Q8N7H1 131 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 ASAP3Q8TDY4 903 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 STAMQ92783 540 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 CEP89Q96ST8 783 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 REEP2Q9BRK0 252 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 KIFC3Q9BVG8 833 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 BCO2Q9BYV7 579 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 CHRDQ9H2X0 955 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 POLD4Q9HCU8 107 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 BLOC1S4Q9NUP1 217 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 KCNH3Q9ULD8 1083 aa7.07□□□□□ -1.28
VPS4B-205ENST00000591383 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
VPS4B-205ENST00000591383 TET1Q8NFU7 2136 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 A0A1W2PQ27 194 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 A0A1W2PQ64 194 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 A0A1W2PQD8 194 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 CCDC169A6NNP5 214 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 K7ENM7 598 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 TNFRSF10AO00220 468 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 KINO60870 393 aaKnown RBP7.06□□□□□ -1.28
VPS4B-205ENST00000591383 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 ACRP10323 421 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 IDEP14735 1019 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 CSF2RAP15509 400 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 CYP11B2P19099 503 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 FGFR4P22455 802 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 CMA1P23946 247 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 MSX1P28360 303 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 CD52P31358 61 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 AFMP43652 599 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 RGS19P49795 217 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 GPC3P51654 580 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 ASIC1P78348 528 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 RBL2Q08999 1139 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 MGAT3Q09327 533 aa7.06□□□□□ -1.28
VPS4B-205ENST00000591383 LAMTOR4Q0VGL1 99 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms