RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 DNM1Q05193 864 aaKnown RBP24.53■■□□□ 1.52
MBD3-208ENST00000590830 KCNC3Q14003 757 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 NAB2Q15742 525 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 AXDND1Q5T1B0 1012 aaPredicted RBP24.53■■□□□ 1.52
MBD3-208ENST00000590830 SHC4Q6S5L8 630 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 TAS1R1Q7RTX1 841 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 ZBTB33Q86T24 672 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 RABGGTAQ92696 567 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 GRXCR2A6NFK2 248 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 BRD1O95696 1058 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 CTSAP10619 480 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 TXLNAP40222 546 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 GRIK3Q13003 919 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 SMC1AQ14683 1233 aaKnown RBP24.52■■□□□ 1.52
MBD3-208ENST00000590830 CLUL1Q15846 466 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 ZNF568Q3ZCX4 644 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 PTCRAQ6ISU1 281 aaPredicted RBP24.52■■□□□ 1.52
MBD3-208ENST00000590830 CCDC73Q6ZRK6 1079 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 DYMQ7RTS9 669 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 DNAJC19Q96DA6 116 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 CHAMP1Q96JM3 812 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 MSLNLQ96KJ4 702 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 PAAF1Q9BRP4 392 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 HAPLN2Q9GZV7 340 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 ZHX3Q9H4I2 956 aa24.52■■□□□ 1.52
MBD3-208ENST00000590830 MEFVO15553 781 aaPredicted RBP24.51■■□□□ 1.51
MBD3-208ENST00000590830 TRAK2O60296 914 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 CUTAO60888 179 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 GRM5P41594 1212 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 STRN3Q13033 797 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 MPZL3Q6UWV2 235 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 SV2BQ7L1I2 683 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 PDILTQ8N807 584 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 DDX12PQ92771 950 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 RPS6KC1Q96S38 1066 aa24.51■■□□□ 1.51
MBD3-208ENST00000590830 UHRF1Q96T88 793 aaPredicted RBP24.51■■□□□ 1.51
MBD3-208ENST00000590830 CDCA3Q99618 268 aaPredicted RBP24.51■■□□□ 1.51
MBD3-208ENST00000590830 TCF20Q9UGU0 1960 aaKnown RBP24.51■■□□□ 1.51
MBD3-208ENST00000590830 LILRB3O75022 631 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 MCF2P10911 925 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 IL9P15248 144 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 NMT1P30419 496 aaKnown RBP24.5■■□□□ 1.51
MBD3-208ENST00000590830 STAT6P42226 847 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 NDUFV1P49821 464 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 OSTNP61366 133 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 ATL3Q6DD88 541 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 ALKAL1Q6UXT8 129 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 ZPBP2Q6X784 338 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 TCHPQ9BT92 498 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 RCOR1Q9UKL0 485 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 BARX2Q9UMQ3 279 aaPredicted RBP24.5■■□□□ 1.51
MBD3-208ENST00000590830 TBX20Q9UMR3 447 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 PCDHA7Q9UN72 937 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 IRAK3Q9Y616 596 aa24.5■■□□□ 1.51
MBD3-208ENST00000590830 MUC3AQ02505 3323 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 CLASP2O75122 1294 aaKnown RBP24.49■■□□□ 1.51
MBD3-208ENST00000590830 TOM1L1O75674 476 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 THP07101 528 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 E2F4Q16254 413 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 XKR4Q5GH76 650 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 TMEM184AQ6ZMB5 413 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 RNF168Q8IYW5 571 aaPredicted RBP24.49■■□□□ 1.51
MBD3-208ENST00000590830 COLEC11Q9BWP8 271 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 MYH15Q9Y2K3 1946 aa24.49■■□□□ 1.51
MBD3-208ENST00000590830 H0YCG3 227 aa24.48■■□□□ 1.51
MBD3-208ENST00000590830 K7ENM7 598 aa24.48■■□□□ 1.51
MBD3-208ENST00000590830 TBCAO75347 108 aaKnown RBP24.48■■□□□ 1.51
MBD3-208ENST00000590830 IGFBP6P24592 240 aaPredicted RBP24.48■■□□□ 1.51
MBD3-208ENST00000590830 TUSC3Q13454 348 aa24.48■■□□□ 1.51
MBD3-208ENST00000590830 PTPN14Q15678 1187 aa24.48■■□□□ 1.51
MBD3-208ENST00000590830 SEZ6Q53EL9 994 aa24.48■■□□□ 1.51
MBD3-208ENST00000590830 ZC2HC1CQ53FD0 456 aaPredicted RBP24.48■■□□□ 1.51
MBD3-208ENST00000590830 GLRA4Q5JXX5 417 aa24.48■■□□□ 1.51
MBD3-208ENST00000590830 APBB1IPQ7Z5R6 666 aaPredicted RBP24.48■■□□□ 1.51
MBD3-208ENST00000590830 KCNG4Q8TDN1 519 aa24.48■■□□□ 1.51
MBD3-208ENST00000590830 PPP1R10Q96QC0 940 aaKnown RBP24.48■■□□□ 1.51
MBD3-208ENST00000590830 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.47■■□□□ 1.51
MBD3-208ENST00000590830 CASTOR2A6NHX0 329 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 SOD2P04179 222 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 HARSP12081 509 aaKnown RBP24.47■■□□□ 1.51
MBD3-208ENST00000590830 GTF2BQ00403 316 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 MCL1Q07820 350 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 PUS10Q3MIT2 529 aaKnown RBP24.47■■□□□ 1.51
MBD3-208ENST00000590830 LLGL2Q6P1M3 1020 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 SFR1Q86XK3 245 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 FAM178BQ8IXR5 827 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 STAMQ92783 540 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 ZMAT2Q96NC0 199 aaKnown RBP24.47■■□□□ 1.51
MBD3-208ENST00000590830 CCDC94Q9BW85 323 aaPredicted RBP24.47■■□□□ 1.51
MBD3-208ENST00000590830 GPR62Q9BZJ7 368 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 ANKFY1Q9P2R3 1169 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 CD207Q9UJ71 328 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 CFAP45Q9UL16 551 aa24.47■■□□□ 1.51
MBD3-208ENST00000590830 SMIM28A0A1B0GU29 152 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 MBTPS2O43462 519 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 NR1I2O75469 434 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 PIGRP01833 764 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 CA8P35219 290 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 COASYQ13057 564 aa24.46■■□□□ 1.51
MBD3-208ENST00000590830 SLC39A4Q6P5W5 647 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms