RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 SLC7A14Q8TBB6 771 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 SLC39A7Q92504 469 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 RABGGTAQ92696 567 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 RRP36Q96EU6 259 aaKnown RBP7.28□□□□□ -1.24
DNMT1-222ENST00000590619 ZSWIM3Q96MP5 696 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 NRBP2Q9NSY0 501 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 GABBR1Q9UBS5 961 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 RAXQ9Y2V3 346 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 CACNA1EQ15878 2313 aa7.28□□□□□ -1.24
DNMT1-222ENST00000590619 ARL5CA6NH57 179 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 PATE3B3GLJ2 98 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 TK2O00142 265 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 ZNF263O14978 683 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 KHNYNO15037 678 aaKnown RBP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 DCLK1O15075 740 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 ZNF862O60290 1169 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 AKAP3O75969 853 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 MS4A1P11836 297 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 CEBPBP17676 345 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 MX1P20591 662 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 SFPQP23246 707 aaKnown RBP eCLIP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 SMARCA1P28370 1054 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 FAM193AP78312 1265 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 TARBP2Q15633 366 aaKnown RBP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 PKN3Q6P5Z2 889 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 CATSPER4Q7RTX7 472 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 PIP4P1Q86T03 277 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 KSR1Q8IVT5 923 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 SMG8Q8ND04 991 aaKnown RBP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 TCEAL4Q96EI5 215 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 CRELD1Q96HD1 420 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 PGBD1Q96JS3 809 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 ASB16Q96NS5 453 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 GAD1Q99259 594 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 INO80BQ9C086 356 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 SLC32A1Q9H598 525 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 CCDC86Q9H6F5 360 aaKnown RBP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 SCUBE2Q9NQ36 999 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 AVENQ9NQS1 362 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 POLR3BQ9NW08 1133 aaPredicted RBP7.27□□□□□ -1.25
DNMT1-222ENST00000590619 PCDHB15Q9Y5E8 787 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 PCDHA10Q9Y5I2 948 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 TICRRQ7Z2Z1 1910 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 CNTNAP2Q9UHC6 1331 aa7.27□□□□□ -1.25
DNMT1-222ENST00000590619 ASCC3Q8N3C0 2202 aaKnown RBP7.26□□□□□ -1.25
DNMT1-222ENST00000590619 MYBPHLA2RUH7 354 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 H0Y626 953 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 NR1I2O75469 434 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 TADA2AO75478 443 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 RHOBTB1O94844 696 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 TRIM16O95361 564 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 PSAPP07602 524 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 ITGA4P13612 1032 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 PTPN2P17706 415 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 CREMQ03060 361 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 CCINQ13939 588 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 RAB33AQ14088 237 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 PRSS36Q5K4E3 855 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 CCNI2Q6ZMN8 369 aaPredicted RBP7.26□□□□□ -1.25
DNMT1-222ENST00000590619 RAB44Q7Z6P3 723 aaPredicted RBP7.26□□□□□ -1.25
DNMT1-222ENST00000590619 CEP57Q86XR8 500 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 MFSD6LQ8IWD5 586 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 SYNPOQ8N3V7 929 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 SRBD1Q8N5C6 995 aaKnown RBP7.26□□□□□ -1.25
DNMT1-222ENST00000590619 GSTCDQ8NEC7 633 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 MDM1Q8TC05 714 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 ZFP42Q96MM3 310 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 UBL7Q96S82 380 aaPredicted RBP7.26□□□□□ -1.25
DNMT1-222ENST00000590619 CEP89Q96ST8 783 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 SPZ1Q9BXG8 430 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 CHMP4BQ9H444 224 aaKnown RBP7.26□□□□□ -1.25
DNMT1-222ENST00000590619 C8orf33Q9H7E9 229 aaPredicted RBP7.26□□□□□ -1.25
DNMT1-222ENST00000590619 CNNM2Q9H8M5 875 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 IFT122Q9HBG6 1241 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 UBN1Q9NPG3 1134 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 ADAM28Q9UKQ2 775 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 NCANO14594 1321 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 SALL3Q9BXA9 1300 aa7.26□□□□□ -1.25
DNMT1-222ENST00000590619 IGKV6-21A0A0C4DH24 114 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 hCG_1642624A0A1W2PR95 340 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 WDR27A2RRH5 827 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 SLC38A8A6NNN8 435 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 FAM86B1E9PN63 330 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 SPECC1L-ADORA2AF8WAN1 911 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 IPO5O00410 1097 aaKnown RBP7.25□□□□□ -1.25
DNMT1-222ENST00000590619 IFIT3O14879 490 aaKnown RBP7.25□□□□□ -1.25
DNMT1-222ENST00000590619 ARHGAP6O43182 974 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 MOSPD3O75425 235 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 MICAL2O94851 1124 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 FAM86B2P0C5J1 330 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 OR1D2P34982 312 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 RDXP35241 583 aaKnown RBP7.25□□□□□ -1.25
DNMT1-222ENST00000590619 CCR2P41597 374 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 SCNN1GP51170 649 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 KPNA1P52294 538 aaPredicted RBP7.25□□□□□ -1.25
DNMT1-222ENST00000590619 SEMA3BQ13214 749 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 PON2Q15165 354 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 IMMTQ16891 758 aaKnown RBP7.25□□□□□ -1.25
DNMT1-222ENST00000590619 FAM171A1Q5VUB5 890 aa7.25□□□□□ -1.25
DNMT1-222ENST00000590619 ZNF746Q6NUN9 644 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms