RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 CTNNB1P35222 781 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 DUSP28Q4G0W2 176 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 TTC39AQ5SRH9 613 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 NFRKBQ6P4R8 1299 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 REXO1Q8N1G1 1221 aaKnown RBP9.16□□□□□ -0.94
SMAD4-209ENST00000589941 DCLK2Q8N568 766 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 DNAJB8Q8NHS0 232 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 NETO1Q8TDF5 533 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 SDR42E1Q8WUS8 393 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 COPS5Q92905 334 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 MEIS3Q99687 375 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 ACBD3Q9H3P7 528 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 ANTXR1Q9H6X2 564 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 SLC38A10Q9HBR0 1119 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 MCM9Q9NXL9 1143 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 GTF2IRD1Q9UHL9 959 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 CDH22Q9UJ99 828 aa9.16□□□□□ -0.94
SMAD4-209ENST00000589941 DOCK5Q9H7D0 1870 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 PTPRCP08575 1304 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 WDFY3Q8IZQ1 3526 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 DNAJB1P25685 340 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 ZNF165P49910 485 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 YARSP54577 528 aaKnown RBP9.15□□□□□ -0.94
SMAD4-209ENST00000589941 RBL2Q08999 1139 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 TRIM71Q2Q1W2 868 aaKnown RBP9.15□□□□□ -0.94
SMAD4-209ENST00000589941 OR6J1Q8NGC5 347 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 BAHD1Q8TBE0 780 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-209ENST00000589941 CAGE1Q8TC20 777 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 CYB5D2Q8WUJ1 264 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 SAMD11Q96NU1 681 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 YME1L1Q96TA2 773 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 PHF7Q9BWX1 381 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-209ENST00000589941 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 MAPK8IP1Q9UQF2 711 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 Q9Y3F1 56 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 R4GN57 208 aa9.15□□□□□ -0.94
SMAD4-209ENST00000589941 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.95
SMAD4-209ENST00000589941 CEP295Q9C0D2 2601 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 ASB14A6NK59 587 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 SRGAP3O43295 1099 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 NDUFB10O96000 172 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 CPT1AP50416 773 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 COASYQ13057 564 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 ANGPT1Q15389 498 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 NKPD1Q17RQ9 610 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 ARSHQ5FYA8 562 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 SFRP5Q5T4F7 317 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 ZNF618Q5T7W0 954 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 IQSEC1Q6DN90 963 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 KREMEN2Q8NCW0 462 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 CHST13Q8NET6 341 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 VN1R2Q8NFZ6 395 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 TGIF2Q9GZN2 237 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 ACAD9Q9H845 621 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 VTA1Q9NP79 307 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 DCP1AQ9NPI6 582 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-209ENST00000589941 RNF146Q9NTX7 359 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 CEP131Q9UPN4 1083 aa9.14□□□□□ -0.95
SMAD4-209ENST00000589941 FNDC1Q4ZHG4 1894 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-209ENST00000589941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-209ENST00000589941 C5orf67F2Z3F1 127 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 NCK2O43639 380 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 PI15O43692 258 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 MMP1P03956 469 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 AMHP03971 560 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 PRNPP04156 253 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 BNIP3Q12983 259 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 MUM1L1Q5H9M0 696 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 C20orf194Q5TEA3 1177 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 WDR63Q8IWG1 891 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 SPACA3Q8IXA5 215 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 LCORLQ8N3X6 602 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 DBF4BQ8NFT6 615 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 KCNG4Q8TDN1 519 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 SSH1Q8WYL5 1049 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 SUSD6Q92537 303 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 KIF2CQ99661 725 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 GMIPQ9P107 970 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 FBXO40Q9UH90 709 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 C2orf16Q68DN1 1984 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 COL4A3Q01955 1670 aa9.13□□□□□ -0.95
SMAD4-209ENST00000589941 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 MIA3Q5JRA6 1907 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 EFCAB14O75071 495 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 CBX7O95931 251 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 LMNAP02545 664 aaKnown RBP9.12□□□□□ -0.95
SMAD4-209ENST00000589941 ERCC5P28715 1186 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-209ENST00000589941 NRIP1P48552 1158 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 ZNF200P98182 395 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-209ENST00000589941 IFI16Q16666 785 aaKnown RBP9.12□□□□□ -0.95
SMAD4-209ENST00000589941 PHACTR4Q8IZ21 702 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 EFHBQ8N7U6 833 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 PRPF38AQ8NAV1 312 aaKnown RBP9.12□□□□□ -0.95
SMAD4-209ENST00000589941 CYP2W1Q8TAV3 490 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 MORC4Q8TE76 937 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms