RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 KIFC3Q9BVG8 833 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 KMT5AQ9NQR1 393 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 PRG3Q9Y2Y8 225 aaPredicted RBP11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 IRAK3Q9Y616 596 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 ANK1P16157 1881 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 PRR23AA6NEV1 266 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 K7ERI5 159 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 NRP1O14786 923 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 DDHD2O94830 711 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 SOD2P04179 222 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 PLA2G4BP0C869 781 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 AKAP5P24588 427 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 CDC25AP30304 524 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 NUBP1P53384 320 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 PEX3P56589 373 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 CREMQ03060 361 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 DSC1Q08554 894 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 SIGLEC14Q08ET2 396 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 STRN3Q13033 797 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 SF3A1Q15459 793 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 IL17AQ16552 155 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 ZNF568Q3ZCX4 644 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 TMEM119Q4V9L6 283 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 ATF7IP2Q5U623 682 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 RINT1Q6NUQ1 792 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 ANKRD54Q6NXT1 300 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 TMEM184AQ6ZMB5 413 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 TMEM173Q86WV6 379 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 CDR2LQ86X02 465 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 ZNF280BQ86YH2 543 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 COLGALT2Q8IYK4 626 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 MRPL43Q8N983 215 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 ATOH1Q92858 354 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 RUSC1Q9BVN2 902 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 COLEC11Q9BWP8 271 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 MRPL4Q9BYD3 311 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 TMEM134Q9H6X4 195 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 MRPL17Q9NRX2 175 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 CLEC1BQ9P126 229 aa11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 RBM19Q9Y4C8 960 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 USP15Q9Y4E8 981 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-211ENST00000589347 SF3B1O75533 1304 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 CLASP2O75122 1294 aaKnown RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 RECQL4O94761 1208 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 KRT18P05783 430 aaKnown RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 SCP2P22307 547 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 ABCD1P33897 745 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 NPTX2P47972 431 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 GLUD2P49448 558 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 YARSP54577 528 aaKnown RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 PTPN14Q15678 1187 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 KIAA1841Q6NSI8 718 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 C1orf186Q6ZWK4 172 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 SYT2Q8N9I0 419 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 BCL7CQ8WUZ0 217 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 NECTIN4Q96NY8 510 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 CCDC94Q9BW85 323 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 ZSCAN16Q9H4T2 348 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 TOPORSQ9NS56 1045 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 SNTG2Q9NY99 539 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 LARSQ9P2J5 1176 aaKnown RBP11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 ARHGAP28Q9P2N2 729 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 DPP7Q9UHL4 492 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 ODF2LQ9ULJ1 636 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 HCFC2Q9Y5Z7 792 aa11.64□□□□□ -0.55
CLPTM1-211ENST00000589347 B4GALT3O60512 393 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 TBCAO75347 108 aaKnown RBP11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 THP07101 528 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 ADH1AP07327 375 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 PLS3P13797 630 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 SYT1P21579 422 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 AVPR2P30518 371 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 NBL1P41271 181 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 ITIH3Q06033 890 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 RESTQ13127 1097 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 TUSC3Q13454 348 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 HSP90AA2PQ14568 343 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 KCNK18Q7Z418 384 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 GPBP1Q86WP2 473 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 VN1R2Q8NFZ6 395 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 SPIRE2Q8WWL2 714 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 AUTS2Q8WXX7 1259 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 SNX21Q969T3 373 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 RIPOR3Q96MK2 946 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 PLIN2Q99541 437 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 PHF7Q9BWX1 381 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 SFXN1Q9H9B4 322 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 MARCH5Q9NX47 278 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 KLK14Q9P0G3 267 aa11.63□□□□□ -0.55
CLPTM1-211ENST00000589347 CCDC39Q9UFE4 941 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms