RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 BTG3Q14201 252 aaPredicted RBP15.92■□□□□ 0.14
CNN1-208ENST00000588935 KLHL40Q2TBA0 621 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 SPOUT1Q5T280 376 aaKnown RBP15.92■□□□□ 0.14
CNN1-208ENST00000588935 GLB1LQ6UWU2 654 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 FAM43BQ6ZT52 329 aaPredicted RBP15.92■□□□□ 0.14
CNN1-208ENST00000588935 ADSSL1Q8N142 457 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 CRIPAKQ8N1N5 446 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 SYAP1Q96A49 352 aaPredicted RBP15.92■□□□□ 0.14
CNN1-208ENST00000588935 CASD1Q96PB1 797 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 RAD9AQ99638 391 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 NKX2-4Q9H2Z4 354 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 KCTD10Q9H3F6 313 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 TYW1Q9NV66 732 aaKnown RBP15.92■□□□□ 0.14
CNN1-208ENST00000588935 MIOSQ9NXC5 875 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 HCSTQ9UBK5 93 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 MSRAQ9UJ68 235 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 CTNND2Q9UQB3 1225 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 YBX2Q9Y2T7 364 aaKnown RBP15.92■□□□□ 0.14
CNN1-208ENST00000588935 INSL6Q9Y581 213 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 STYXL1Q9Y6J8 313 aa15.92■□□□□ 0.14
CNN1-208ENST00000588935 TRIM49BA6NDI0 452 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 PPP1R3GB7ZBB8 358 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 HOXA2O43364 376 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 CALUO43852 315 aaPredicted RBP15.91■□□□□ 0.14
CNN1-208ENST00000588935 CXCL8P10145 99 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 GARTP22102 1010 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 SCNN1GP51170 649 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 NLRP12P59046 1061 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 SKOR2Q2VWA4 1001 aaPredicted RBP15.91■□□□□ 0.14
CNN1-208ENST00000588935 GLRA4Q5JXX5 417 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 SASS6Q6UVJ0 657 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 TRIML1Q8N9V2 468 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 EEF2KMTQ96G04 330 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 PBX4Q9BYU1 374 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 TMEM117Q9H0C3 514 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 RPF1Q9H9Y2 349 aaKnown RBP15.91■□□□□ 0.14
CNN1-208ENST00000588935 HSPBP1Q9NZL4 362 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 GIT1Q9Y2X7 761 aa15.91■□□□□ 0.14
CNN1-208ENST00000588935 ARL5CA6NH57 179 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 PDXKO00764 312 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 EXOC3O60645 756 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 CA3P07451 260 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 CLTAP09496 248 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 PMS1P54277 932 aaKnown RBP15.9■□□□□ 0.14
CNN1-208ENST00000588935 RNASELQ05823 741 aaKnown RBP15.9■□□□□ 0.14
CNN1-208ENST00000588935 SLC10A6Q3KNW5 377 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 NOMO2Q5JPE7 1267 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 CEP135Q66GS9 1140 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 ANKRD40Q6AI12 368 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 GPD1LQ8N335 351 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 FIBCD1Q8N539 461 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 URGCPQ8TCY9 931 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 NELFBQ8WX92 580 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 P2RX5Q93086 422 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 ZNF689Q96CS4 500 aaPredicted RBP15.9■□□□□ 0.14
CNN1-208ENST00000588935 RPS6KC1Q96S38 1066 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 GTPBP4Q9BZE4 634 aaKnown RBP15.9■□□□□ 0.14
CNN1-208ENST00000588935 CERS4Q9HA82 394 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 UBN1Q9NPG3 1134 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 PCDHA11Q9Y5I1 949 aa15.9■□□□□ 0.14
CNN1-208ENST00000588935 TDRD15B5MCY1 1934 aaKnown RBP15.9■□□□□ 0.14
CNN1-208ENST00000588935 LACTBL1A8MY62 500 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 PSMA7O14818 248 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 EXTL3O43909 919 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 ARHGEF15O94989 841 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 NR3C1P04150 777 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 HTRA4P83105 476 aaPredicted RBP15.89■□□□□ 0.13
CNN1-208ENST00000588935 ENOX2Q16206 610 aaKnown RBP15.89■□□□□ 0.13
CNN1-208ENST00000588935 DPCR1Q3MIW9 517 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 CRELD2Q6UXH1 353 aaPredicted RBP15.89■□□□□ 0.13
CNN1-208ENST00000588935 LRRC55Q6ZSA7 311 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 SPRED2Q7Z698 418 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 CBWD2Q8IUF1 395 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 XXYLT1Q8NBI6 393 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 GOLGA5Q8TBA6 731 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 RABGGTAQ92696 567 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 DHTKD1Q96HY7 919 aaPredicted RBP15.89■□□□□ 0.13
CNN1-208ENST00000588935 FAM193BQ96PV7 902 aaPredicted RBP15.89■□□□□ 0.13
CNN1-208ENST00000588935 TSG101Q99816 390 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 CPSF3Q9UKF6 684 aaKnown RBP15.89■□□□□ 0.13
CNN1-208ENST00000588935 MTUS1Q9ULD2 1270 aa15.89■□□□□ 0.13
CNN1-208ENST00000588935 A0A1W2PPC1 479 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 SOX1O00570 391 aaPredicted RBP15.88■□□□□ 0.13
CNN1-208ENST00000588935 MEFVO15553 781 aaPredicted RBP15.88■□□□□ 0.13
CNN1-208ENST00000588935 FAM189A1O60320 539 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 LDHAP00338 332 aaKnown RBP15.88■□□□□ 0.13
CNN1-208ENST00000588935 CCNE1P24864 410 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 CASP4P49662 377 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 ADAM9Q13443 819 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 RAB30Q15771 203 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 CENPPQ6IPU0 288 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 RBM43Q6ZSC3 357 aaKnown RBP15.88■□□□□ 0.13
CNN1-208ENST00000588935 ZNF280BQ86YH2 543 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 CMTR2Q8IYT2 770 aaKnown RBP15.88■□□□□ 0.13
CNN1-208ENST00000588935 TMEM130Q8N3G9 435 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 GZF1Q9H116 711 aaPredicted RBP15.88■□□□□ 0.13
CNN1-208ENST00000588935 TOPORSQ9NS56 1045 aaPredicted RBP15.88■□□□□ 0.13
CNN1-208ENST00000588935 TBC1D13Q9NVG8 400 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 CACNG4Q9UBN1 327 aa15.88■□□□□ 0.13
CNN1-208ENST00000588935 PLAGL2Q9UPG8 496 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms