RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 TRIP11Q15643 1979 aa6.35□□□□□ -1.39
CHUK-203ENST00000588656 CCDC69A6NI79 296 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
CHUK-203ENST00000588656 C2CD4DB7Z1M9 353 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SH2B2O14492 632 aaPredicted RBP6.34□□□□□ -1.39
CHUK-203ENST00000588656 NCK2O43639 380 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 RPS6KA5O75582 802 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 STAM2O75886 525 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 EYA4O95677 639 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 BRD1O95696 1058 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 CCNE2O96020 404 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 STAG3L1P0CL83 205 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 KLRC1P26715 233 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 NOS3P29474 1203 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 AVPR2P30518 371 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SARSP49591 514 aaKnown RBP6.34□□□□□ -1.39
CHUK-203ENST00000588656 METAP2P50579 478 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHUK-203ENST00000588656 STAT5BP51692 787 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 CLCN3P51790 818 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SIGLEC14Q08ET2 396 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 COASYQ13057 564 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SART3Q15020 963 aaKnown RBP6.34□□□□□ -1.39
CHUK-203ENST00000588656 PTPN21Q16825 1174 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 DUSP6Q16828 381 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 JAKMIP3Q5VZ66 844 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 WWC2Q6AWC2 1192 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SYCE2Q6PIF2 218 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 CASC1Q6TDU7 716 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 LRRC55Q6ZSA7 311 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 FAM228AQ86W67 206 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 CCDC60Q8IWA6 550 aaPredicted RBP6.34□□□□□ -1.39
CHUK-203ENST00000588656 CKAP2LQ8IYA6 745 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 METTL13Q8N6R0 699 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 FAM200AQ8TCP9 573 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 P2RX5Q93086 422 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 GJA10Q969M2 543 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 PPP2R3CQ969Q6 453 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 NEK1Q96PY6 1258 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SENP7Q9BQF6 1050 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SH2D3AQ9BRG2 576 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SDF4Q9BRK5 362 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SPZ1Q9BXG8 430 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 ANO3Q9BYT9 981 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 MAF1Q9H063 256 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 SMG9Q9H0W8 520 aaKnown RBP6.34□□□□□ -1.39
CHUK-203ENST00000588656 POMKQ9H5K3 350 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 CWH43Q9H720 699 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 ERVK-5Q9HDB9 667 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 JADE2Q9NQC1 790 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 KCNH7Q9NS40 1196 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 NAP1L2Q9ULW6 460 aaPredicted RBP6.34□□□□□ -1.39
CHUK-203ENST00000588656 RNF112Q9ULX5 631 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 ST3GAL5Q9UNP4 418 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 DMXL1Q9Y485 3027 aa6.34□□□□□ -1.39
CHUK-203ENST00000588656 TMEM150BA6NC51 233 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 XYLBO75191 536 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 DDAH1O94760 285 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 SSBP05455 408 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHUK-203ENST00000588656 PSAPP07602 524 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 KIF5BP33176 963 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 NAPAP54920 295 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 PLAURQ03405 335 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 CBX2Q14781 532 aaPredicted RBP6.33□□□□□ -1.4
CHUK-203ENST00000588656 RARS2Q5T160 578 aaKnown RBP6.33□□□□□ -1.4
CHUK-203ENST00000588656 SWSAP1Q6NVH7 229 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 ANKRD54Q6NXT1 300 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 TMEM130Q8N3G9 435 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 LRRC71Q8N4P6 559 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 SAMD3Q8N6K7 520 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 TMEM105Q8N8V8 129 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 KREMEN2Q8NCW0 462 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 GIMAP8Q8ND71 665 aaPredicted RBP6.33□□□□□ -1.4
CHUK-203ENST00000588656 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 ATP8B4Q8TF62 1192 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 MXRA8Q9BRK3 442 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 S1PR5Q9H228 398 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 AGO4Q9HCK5 861 aaKnown RBP6.33□□□□□ -1.4
CHUK-203ENST00000588656 SRA1Q9HD15 236 aaKnown RBP6.33□□□□□ -1.4
CHUK-203ENST00000588656 RNF19AQ9NV58 838 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 AKT3Q9Y243 479 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 PCDHB12Q9Y5F1 795 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 PCDHA2Q9Y5H9 948 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 FANCMQ8IYD8 2048 aa6.33□□□□□ -1.4
CHUK-203ENST00000588656 SMIM35A0A1B0GVV1 85 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 RRN3P2A6NIE6 340 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 C9IYK1 514 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 FAM86B1E9PN63 330 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 FSCN2O14926 492 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 SLC27A2O14975 620 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 SGSM2O43147 1006 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 CHMP2AO43633 222 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 DTNBO60941 627 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 FAM86B2P0C5J1 330 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 CPA1P15085 419 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 ZNF76P36508 570 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 TRAF1Q13077 416 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 TMTC3Q6ZXV5 915 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 TMC7Q7Z402 723 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 FRMD5Q7Z6J6 570 aa6.32□□□□□ -1.4
CHUK-203ENST00000588656 TMEM173Q86WV6 379 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms