RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 RIN2Q8WYP3 895 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-206ENST00000588300 ADPGKQ9BRR6 497 aa17.6■□□□□ 0.41
ERCC1-206ENST00000588300 LLPHQ9BRT6 129 aaKnown RBP17.6■□□□□ 0.41
ERCC1-206ENST00000588300 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-206ENST00000588300 PDZD7Q9H5P4 517 aa17.6■□□□□ 0.41
ERCC1-206ENST00000588300 SF3B1O75533 1304 aaKnown RBP eCLIP17.6■□□□□ 0.41
ERCC1-206ENST00000588300 TGM5O43548 720 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 ST18O60284 1047 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 N4BP1O75113 896 aaKnown RBP17.59■□□□□ 0.41
ERCC1-206ENST00000588300 PRKCBP05771 671 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 SPATA31D3P0C874 917 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 CYP11B2P19099 503 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 MUTP22033 750 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 NAMPTP43490 491 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 GNL2Q13823 731 aaKnown RBP17.59■□□□□ 0.41
ERCC1-206ENST00000588300 PPP2R5AQ15172 486 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 ZNF174Q15697 407 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 HAUS3Q68CZ6 603 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 SPATA31D4Q6ZUB0 917 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 GLYCTKQ8IVS8 523 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 FLCNQ8NFG4 579 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 RABGGTAQ92696 567 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 ZNF707Q96C28 371 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-206ENST00000588300 PIDD1Q9HB75 910 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 ZDHHC7Q9NXF8 308 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 SNTG2Q9NY99 539 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 FBXL21Q9UKT6 434 aa17.59■□□□□ 0.41
ERCC1-206ENST00000588300 CASTOR2A6NHX0 329 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 TTLL13PA6NNM8 815 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 ACKR2O00590 384 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 GFRA3O60609 400 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 PAPLNO95428 1278 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 THP07101 528 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 RPL17P18621 184 aaKnown RBP17.58■□□□□ 0.4
ERCC1-206ENST00000588300 TTC38Q5R3I4 469 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 CWF19L1Q69YN2 538 aaKnown RBP17.58■□□□□ 0.4
ERCC1-206ENST00000588300 LILRA6Q6PI73 481 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 DEPTORQ8TB45 409 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 PAAF1Q9BRP4 392 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 NT5C3AQ9H0P0 336 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 EPS15L1Q9UBC2 864 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 CACNG4Q9UBN1 327 aa17.58■□□□□ 0.4
ERCC1-206ENST00000588300 PTGESO14684 152 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 RECQL4O94761 1208 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 SEC24BO95487 1268 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 LIG1P18858 919 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 RBM25P49756 843 aaKnown RBP17.57■□□□□ 0.4
ERCC1-206ENST00000588300 HMGN5P82970 282 aaKnown RBP17.57■□□□□ 0.4
ERCC1-206ENST00000588300 RTP2Q5QGT7 225 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 PRSS55Q6UWB4 352 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-206ENST00000588300 FBXO18Q8NFZ0 1043 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 HASPINQ8TF76 798 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 IFT74Q96LB3 600 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 TTPALQ9BTX7 342 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 PRKD2Q9BZL6 878 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 CCDC113Q9H0I3 377 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 DAXXQ9UER7 740 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-206ENST00000588300 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
ERCC1-206ENST00000588300 DOCK8Q8NF50 2099 aa17.57■□□□□ 0.4
ERCC1-206ENST00000588300 USP34Q70CQ2 3546 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 KIF4AO95239 1232 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 AOC1P19801 751 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 CCT6AP40227 531 aaKnown RBP17.56■□□□□ 0.4
ERCC1-206ENST00000588300 TRAPPC10P48553 1259 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 ELAVL2Q12926 359 aaKnown RBP17.56■□□□□ 0.4
ERCC1-206ENST00000588300 DCAF4L1Q3SXM0 396 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 FAM171A1Q5VUB5 890 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 SIX5Q8N196 739 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 FAM184AQ8NB25 1140 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 PIK3R5Q8WYR1 880 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 NXPE3Q969Y0 559 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 ZSCAN31Q96LW9 406 aaPredicted RBP17.56■□□□□ 0.4
ERCC1-206ENST00000588300 MYADMQ96S97 322 aa17.56■□□□□ 0.4
ERCC1-206ENST00000588300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.56■□□□□ 0.4
ERCC1-206ENST00000588300 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 NARSO43776 548 aaKnown RBP17.55■□□□□ 0.4
ERCC1-206ENST00000588300 ZMYND10O75800 440 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 EDN1P05305 212 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 NPR3P17342 541 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
ERCC1-206ENST00000588300 EFNA5P52803 228 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 NAB2Q15742 525 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 PSMD5Q16401 504 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 EEF1DP3Q658K8 133 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 PDXDC1Q6P996 788 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 GET4Q7L5D6 327 aaPredicted RBP17.55■□□□□ 0.4
ERCC1-206ENST00000588300 CEP57Q86XR8 500 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 RSAD2Q8WXG1 361 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 KIFAP3Q92845 792 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 RTP3Q9BQQ7 232 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 BHMT2Q9H2M3 363 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 WNT16Q9UBV4 365 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 LRWD1Q9UFC0 647 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 FBXW11Q9UKB1 542 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 USP20Q9Y2K6 914 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 GDAQ9Y2T3 454 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 STK24Q9Y6E0 443 aa17.55■□□□□ 0.4
ERCC1-206ENST00000588300 CFHP08603 1231 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms