RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 C1orf112Q9NSG2 853 aa9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 ARGLU1Q9NWB6 273 aaPredicted RBP9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 RAB20Q9NX57 234 aa9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 RBAKQ9NYW8 714 aaPredicted RBP9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 ANKFY1Q9P2R3 1169 aa9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 Q9Y3F1 56 aa9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 SAR1BQ9Y6B6 198 aa9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 ADGRA2Q96PE1 1338 aa9.5□□□□□ -0.89
NEDD4L-221ENST00000588066 A0A087X0T9 212 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 A0A0A6YYK5 440 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 ZBTB42B2RXF5 422 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 H3BRB1 525 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 INO80B-WBP1J3KQ70 363 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 ZNF263O14978 683 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 KPNA6O60684 536 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PHACTR2O75167 634 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 IL18RAPO95256 599 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 C22orf31O95567 290 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 MMP3P08254 477 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 FAM228BP0C875 321 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 SMPD1P17405 629 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 TBXAS1P24557 533 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 YY1P25490 414 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 KLRC1P26715 233 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PTENP60484 403 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 APBA1Q02410 837 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 GCNT1Q02742 428 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 NCBP1Q09161 790 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PPFIA1Q13136 1202 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 BIRC3Q13489 604 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PRPF4BQ13523 1007 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 FAM187BQ17R55 369 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 C1orf220Q5T0J3 134 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PAPD7Q5XG87 772 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 CCDC70Q6NSX1 233 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PPP1R2P3Q6NXS1 205 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 GJB7Q6PEY0 223 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 MPZL3Q6UWV2 235 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 C17orf99Q6UX52 265 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 SV2AQ7L0J3 742 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 ZNF571Q7Z3V5 609 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 SAPCD2Q86UD0 394 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 ZNF410Q86VK4 478 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 BRSK2Q8IWQ3 736 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 SYCE1Q8N0S2 351 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 PPM1KQ8N3J5 372 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 SMC1BQ8NDV3 1235 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 NPLOC4Q8TAT6 608 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 U2AF1L4Q8WU68 220 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 RABGGTAQ92696 567 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 HHIPL1Q96JK4 782 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 APBA2Q99767 749 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 ACO2Q99798 780 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 INO80BQ9C086 356 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 LACRTQ9GZZ8 138 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 CCDC113Q9H0I3 377 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 FZD8Q9H461 694 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 TUT1Q9H6E5 874 aaKnown RBP9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 RNF14Q9UBS8 474 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 TNFSF13BQ9Y275 285 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 TLL2Q9Y6L7 1015 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 SIP14410 1827 aa9.49□□□□□ -0.89
NEDD4L-221ENST00000588066 MCM3APO60318 1980 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 FOXN3O00409 490 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 IGF2BP3O00425 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 TNPO2O14787 897 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 MSCO60682 206 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 TADA3O75528 432 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 MCF2P10911 925 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 USP8P40818 1118 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 PIK3CAP42336 1068 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 PAFAH1B1P43034 410 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 CPT1AP50416 773 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 CHMP4BP1P59074 171 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 YWHAEP62258 255 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 IGBP1P78318 339 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 MCL1Q07820 350 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 PCBP1Q15365 356 aaKnown RBP eCLIP9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 ZACNQ401N2 412 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 ATF7IP2Q5U623 682 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 MTHFD1LQ6UB35 978 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 TSHZ1Q6ZSZ6 1077 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 WDR49Q8IV35 697 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 FAM71AQ8IYT1 594 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 LRRC71Q8N4P6 559 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 CAGE1Q8TC20 777 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 PLEKHO2Q8TD55 490 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 CTNNBL1Q8WYA6 563 aaPredicted RBP9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 TAF4BQ92750 862 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 FAM212AQ96EL1 285 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 NLRP4Q96MN2 994 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 SCLT1Q96NL6 688 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 AGPAT1Q99943 283 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 C16orf70Q9BSU1 422 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 KATNAL1Q9BW62 490 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 RNPEPQ9H4A4 650 aa9.48□□□□□ -0.89
NEDD4L-221ENST00000588066 TRIM10Q9UDY6 481 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms