RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 LIG1P18858 919 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 GJB2P29033 226 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 ABCD1P33897 745 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 SMTNP53814 917 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 ATP2C1P98194 919 aaPredicted RBP12.38□□□□□ -0.43
ACTN4-209ENST00000586538 ATF7IP2Q5U623 682 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 HFE2Q6ZVN8 426 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 GPR149Q86SP6 731 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
ACTN4-209ENST00000586538 C4orf32Q8N8J7 132 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 PBXIP1Q96AQ6 731 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 AK8Q96MA6 479 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 UROC1Q96N76 676 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 CCDC94Q9BW85 323 aaPredicted RBP12.38□□□□□ -0.43
ACTN4-209ENST00000586538 MRPL4Q9BYD3 311 aaKnown RBP12.38□□□□□ -0.43
ACTN4-209ENST00000586538 CCDC113Q9H0I3 377 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 IRF2BPLQ9H1B7 796 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 TMEM134Q9H6X4 195 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 RXFP1Q9HBX9 757 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 A0A087WWV3 80 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 TEX28O15482 410 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 TRAPPC3O43617 180 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 B4GALT3O60512 393 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 LILRB3O75022 631 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 RECQL4O94761 1208 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 PDCP20941 246 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 TOB1P50616 345 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-209ENST00000586538 AFF1P51825 1210 aaKnown RBP12.37□□□□□ -0.43
ACTN4-209ENST00000586538 NUBP1P53384 320 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 STRN3Q13033 797 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 NBR1Q14596 966 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 KIAA0319Q5VV43 1072 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 TMC5Q6UXY8 1006 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 BRAPQ7Z569 592 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-209ENST00000586538 CALML4Q96GE6 196 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 VN1R3Q9BXE9 311 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 KMT5AQ9NQR1 393 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 CHST7Q9NS84 486 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 ZDHHC7Q9NXF8 308 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 SNTG2Q9NY99 539 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
ACTN4-209ENST00000586538 C2CD4DB7Z1M9 353 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 HIP1RO75146 1068 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 GUCY2CP25092 1073 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 PEX3P56589 373 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 ZNF568Q3ZCX4 644 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 HYIQ5T013 277 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 LIN9Q5TKA1 542 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 LARP1BQ659C4 914 aaKnown RBP12.36□□□□□ -0.43
ACTN4-209ENST00000586538 FBXL6Q8N531 539 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 GSTCDQ8NEC7 633 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 RIN2Q8WYP3 895 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-209ENST00000586538 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 TTPALQ9BTX7 342 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 PIDD1Q9HB75 910 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 KLK14Q9P0G3 267 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 LARSQ9P2J5 1176 aaKnown RBP12.36□□□□□ -0.43
ACTN4-209ENST00000586538 RAPGEFL1Q9UHV5 662 aa12.36□□□□□ -0.43
ACTN4-209ENST00000586538 VWA3AA6NCI4 1184 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 E9PMD0 336 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 TMEM189-UBE2V1I3L0A0 370 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 EFEMP2O95967 443 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
ACTN4-209ENST00000586538 NPTX2P47972 431 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 PTPN5P54829 565 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
ACTN4-209ENST00000586538 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.35□□□□□ -0.43
ACTN4-209ENST00000586538 RTL10Q7L3V2 364 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 C12orf76Q8N812 135 aaPredicted RBP12.35□□□□□ -0.43
ACTN4-209ENST00000586538 KREMEN2Q8NCW0 462 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 RASSF8Q8NHQ8 419 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
ACTN4-209ENST00000586538 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 TCHPQ9BT92 498 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 MIOSQ9NXC5 875 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 IGSF9Q9P2J2 1179 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 ARHGAP28Q9P2N2 729 aa12.35□□□□□ -0.43
ACTN4-209ENST00000586538 DENND4AQ7Z401 1863 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 MCF2P10911 925 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 PLS3P13797 630 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 UBA7P41226 1012 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 GRM5P41594 1212 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 PSMD5Q16401 504 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 ECM1Q16610 540 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 KYAT1Q16773 422 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 MPZL3Q6UWV2 235 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 C1orf186Q6ZWK4 172 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 SYT2Q8N9I0 419 aaPredicted RBP12.34□□□□□ -0.43
ACTN4-209ENST00000586538 SPIRE2Q8WWL2 714 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 PIK3R5Q8WYR1 880 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 SMG7Q92540 1137 aaKnown RBP12.34□□□□□ -0.43
ACTN4-209ENST00000586538 NXPE3Q969Y0 559 aa12.34□□□□□ -0.43
ACTN4-209ENST00000586538 ACAP3Q96P50 834 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms