RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 DRC1Q96MC2 740 aa18.69■□□□□ 0.58
TRIM47-203ENST00000586495 KIFC3Q9BVG8 833 aa18.69■□□□□ 0.58
TRIM47-203ENST00000586495 GPR62Q9BZJ7 368 aa18.69■□□□□ 0.58
TRIM47-203ENST00000586495 POLD4Q9HCU8 107 aa18.69■□□□□ 0.58
TRIM47-203ENST00000586495 SMC3Q9UQE7 1217 aa18.69■□□□□ 0.58
TRIM47-203ENST00000586495 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.69■□□□□ 0.58
TRIM47-203ENST00000586495 PHLPP2Q6ZVD8 1323 aa18.69■□□□□ 0.58
TRIM47-203ENST00000586495 CCDC169A6NNP5 214 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 PP2D1A8MPX8 630 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 F8W810 466 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 RECQL4O94761 1208 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 C1RP00736 705 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 CDC25AP30304 524 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 PEX3P56589 373 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 DMP1Q13316 513 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-203ENST00000586495 ATF7IP2Q5U623 682 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 CYP26C1Q6V0L0 522 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 SUGP1Q8IWZ8 645 aaKnown RBP18.68■□□□□ 0.58
TRIM47-203ENST00000586495 ZDHHC14Q8IZN3 488 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 HDAC7Q8WUI4 952 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 ACSF2Q96CM8 615 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-203ENST00000586495 TIPINQ9BVW5 301 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 C17orf75Q9HAS0 396 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 MAN1C1Q9NR34 630 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 FNIP2Q9P278 1114 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 KCNG1Q9UIX4 513 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 SORCS3Q9UPU3 1222 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 TNFSF13BQ9Y275 285 aa18.68■□□□□ 0.58
TRIM47-203ENST00000586495 SF3B1O75533 1304 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRIM47-203ENST00000586495 PTGESO14684 152 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 HIP1RO75146 1068 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 CD2BP2O95400 341 aaKnown RBP18.67■□□□□ 0.58
TRIM47-203ENST00000586495 MTMR3Q13615 1198 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 IL17AQ16552 155 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 EEF1DP3Q658K8 133 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 RINT1Q6NUQ1 792 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 CCDC149Q6ZUS6 474 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 UBALD2Q8IYN6 164 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 KREMEN2Q8NCW0 462 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 CMASQ8NFW8 434 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-203ENST00000586495 MMTAG2Q9BU76 263 aaKnown RBP18.67■□□□□ 0.58
TRIM47-203ENST00000586495 NT5C3AQ9H0P0 336 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 TMEM134Q9H6X4 195 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 USP20Q9Y2K6 914 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 GDAQ9Y2T3 454 aa18.67■□□□□ 0.58
TRIM47-203ENST00000586495 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
TRIM47-203ENST00000586495 CASTOR2A6NHX0 329 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 EDN1P05305 212 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 NPTX2P47972 431 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 ELAVL2Q12926 359 aaKnown RBP18.66■□□□□ 0.58
TRIM47-203ENST00000586495 ZRSR1Q15695 479 aaKnown RBP18.66■□□□□ 0.58
TRIM47-203ENST00000586495 HYIQ5T013 277 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 NT5DC1Q5TFE4 455 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 ARL6IP4Q66PJ3 421 aaKnown RBP18.66■□□□□ 0.58
TRIM47-203ENST00000586495 C1orf186Q6ZWK4 172 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 OTOP3Q7RTS5 596 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 RIN2Q8WYP3 895 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-203ENST00000586495 RABGGTAQ92696 567 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 TBC1D32Q96NH3 1257 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 PLEKHA4Q9H4M7 779 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 KMT5AQ9NQR1 393 aa18.66■□□□□ 0.58
TRIM47-203ENST00000586495 CCDC195A0A1B0GUA6 201 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 VWA3AA6NCI4 1184 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 YARSP54577 528 aaKnown RBP18.65■□□□□ 0.58
TRIM47-203ENST00000586495 LARP1BQ659C4 914 aaKnown RBP18.65■□□□□ 0.58
TRIM47-203ENST00000586495 PALB2Q86YC2 1186 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 DAW1Q8N136 415 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 FBXL6Q8N531 539 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 ASIC4Q96FT7 647 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 CDK5RAP3Q96JB5 506 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 PRRX2Q99811 253 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 PAAF1Q9BRP4 392 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 MRPL4Q9BYD3 311 aaKnown RBP18.65■□□□□ 0.58
TRIM47-203ENST00000586495 RHOBTB2Q9BYZ6 727 aa18.65■□□□□ 0.58
TRIM47-203ENST00000586495 GUCY2CP25092 1073 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 PDXDC1Q6P996 788 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 KCNK18Q7Z418 384 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 HASPINQ8TF76 798 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 STAMQ92783 540 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 B3GALT6Q96L58 329 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 ACO2Q99798 780 aaKnown RBP18.64■□□□□ 0.57
TRIM47-203ENST00000586495 TTPALQ9BTX7 342 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 RUSC1Q9BVN2 902 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 CCDC94Q9BW85 323 aaPredicted RBP18.64■□□□□ 0.57
TRIM47-203ENST00000586495 TOPORSQ9NS56 1045 aaPredicted RBP18.64■□□□□ 0.57
TRIM47-203ENST00000586495 ARHGAP28Q9P2N2 729 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 CACNG4Q9UBN1 327 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 LIMD1Q9UGP4 676 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 MYO10Q9HD67 2058 aa18.64■□□□□ 0.57
TRIM47-203ENST00000586495 TGM5O43548 720 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 KIF4AO95239 1232 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
TRIM47-203ENST00000586495 GRM5P41594 1212 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 SMTNP53814 917 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 MAPK7Q13164 816 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 NAB2Q15742 525 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 ZNF568Q3ZCX4 644 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 FAM171A1Q5VUB5 890 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 CEP57Q86XR8 500 aa18.63■□□□□ 0.57
TRIM47-203ENST00000586495 GLYCTKQ8IVS8 523 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms