RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 ERP27Q96DN0 273 aa7.57□□□□□ -1.2
TPM4-203ENST00000586193 MSLNLQ96KJ4 702 aa7.57□□□□□ -1.2
TPM4-203ENST00000586193 OSBPL5Q9H0X9 879 aaPredicted RBP7.57□□□□□ -1.2
TPM4-203ENST00000586193 SARS2Q9NP81 518 aaKnown RBP7.57□□□□□ -1.2
TPM4-203ENST00000586193 INCENPQ9NQS7 918 aa7.57□□□□□ -1.2
TPM4-203ENST00000586193 CNNM1Q9NRU3 951 aa7.57□□□□□ -1.2
TPM4-203ENST00000586193 SACM1LQ9NTJ5 587 aa7.57□□□□□ -1.2
TPM4-203ENST00000586193 GGA3Q9NZ52 723 aa7.57□□□□□ -1.2
TPM4-203ENST00000586193 WASF3Q9UPY6 502 aa7.57□□□□□ -1.2
TPM4-203ENST00000586193 NPC1O15118 1278 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 FIBPO43427 364 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 AKR1B10O60218 316 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 NRP2O60462 931 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 ARIH2O95376 493 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 FGFR2P21802 821 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 CNTFP26441 200 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 ADSLP30566 484 aaPredicted RBP7.56□□□□□ -1.2
TPM4-203ENST00000586193 NRG3P56975 720 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 CYP4F8P98187 520 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 TARDBPQ13148 414 aaKnown RBP eCLIP7.56□□□□□ -1.2
TPM4-203ENST00000586193 PDE1CQ14123 709 aaPredicted RBP7.56□□□□□ -1.2
TPM4-203ENST00000586193 RALGPS1Q5JS13 557 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 KHDC1LQ5JSQ8 128 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 JMJD6Q6NYC1 403 aaPredicted RBP7.56□□□□□ -1.2
TPM4-203ENST00000586193 FAM180AQ6UWF9 173 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 TBC1D1Q86TI0 1168 aaPredicted RBP7.56□□□□□ -1.2
TPM4-203ENST00000586193 RSPH3Q86UC2 560 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 FAM129CQ86XR2 697 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 FAM26EQ8N5C1 309 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 ASB11Q8WXH4 323 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 HRASLS5Q96KN8 279 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 MRGPRX4Q96LA9 322 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 HEPHQ9BQS7 1158 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 BRIP1Q9BX63 1249 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 CARS2Q9HA77 564 aaKnown RBP7.56□□□□□ -1.2
TPM4-203ENST00000586193 EPB41L4AQ9HCS5 686 aaPredicted RBP7.56□□□□□ -1.2
TPM4-203ENST00000586193 RASSF1Q9NS23 344 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 COL20A1Q9P218 1284 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 MYO1AQ9UBC5 1043 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 CCDC39Q9UFE4 941 aa7.56□□□□□ -1.2
TPM4-203ENST00000586193 A6NCN8 305 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 ACKR2O00590 384 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 ARHGAP6O43182 974 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 IRAK2O43187 625 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 POLBP06746 335 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 CAPN3P20807 821 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 SLC6A9P48067 706 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 HTRA4P83105 476 aaPredicted RBP7.55□□□□□ -1.2
TPM4-203ENST00000586193 SNAPC2Q13487 334 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 AOC3Q16853 763 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 VPS53Q5VIR6 699 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 ZNF787Q6DD87 383 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 GALNT15Q8N3T1 639 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 ANKS4BQ8N8V4 417 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 SUCLG2Q96I99 432 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 TMX3Q96JJ7 454 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 MRGPRX1Q96LB2 322 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 FAM167BQ9BTA0 163 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 ALG13Q9NP73 1137 aaKnown RBP7.55□□□□□ -1.2
TPM4-203ENST00000586193 SLAMF8Q9P0V8 285 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 AFF4Q9UHB7 1163 aaKnown RBP7.55□□□□□ -1.2
TPM4-203ENST00000586193 FEZ2Q9UHY8 353 aaPredicted RBP7.55□□□□□ -1.2
TPM4-203ENST00000586193 SLC45A1Q9Y2W3 748 aa7.55□□□□□ -1.2
TPM4-203ENST00000586193 AQRO60306 1485 aaKnown RBP eCLIP7.55□□□□□ -1.25e-18■■□□□ 11.6
TPM4-203ENST00000586193 TARBP1Q13395 1621 aaKnown RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 ZC3H12DA2A288 527 aaKnown RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 NOTOA8MTQ0 251 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 TRIM38O00635 465 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 CYP26A1O43174 497 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 TMEM127O75204 238 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 SEC24DO94855 1032 aaPredicted RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 EN2P19622 333 aaPredicted RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 MALP21145 153 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 APEX1P27695 318 aaKnown RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 NFIAQ12857 509 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 SLC30A5Q8TAD4 765 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 CCHCR1Q8TD31 782 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 HOXB13Q92826 284 aaPredicted RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 P2RX7Q99572 595 aaKnown RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 UNC45AQ9H3U1 944 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 BLOC1S4Q9NUP1 217 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 PIH1D1Q9NWS0 290 aaKnown RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 GALNT8Q9NY28 637 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 KCMF1Q9P0J7 381 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 NUDT5Q9UKK9 219 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 MAN2B2Q9Y2E5 1009 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 SIK3Q9Y2K2 1263 aa7.54□□□□□ -1.2
TPM4-203ENST00000586193 POLA1P09884 1462 aaPredicted RBP7.54□□□□□ -1.2
TPM4-203ENST00000586193 ITIH6Q6UXX5 1313 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 A0A0A6YYK5 440 aaPredicted RBP7.53□□□□□ -1.2
TPM4-203ENST00000586193 TISP43B9A030 160 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 B9A039 149 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 EFEMP2O95967 443 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 LRG1P02750 347 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 CKMT1AP12532 417 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 CTSSP25774 331 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 SERPINF1P36955 418 aa7.53□□□□□ -1.2
TPM4-203ENST00000586193 RPS16P62249 146 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms