RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 C11orf84Q9BUA3 381 aaPredicted RBP13.19□□□□□ -0.3
CNN1-204ENST00000586059 STRA6Q9BX79 667 aa13.19□□□□□ -0.3
CNN1-204ENST00000586059 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
CNN1-204ENST00000586059 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
CNN1-204ENST00000586059 PCDHB12Q9Y5F1 795 aa13.19□□□□□ -0.3
CNN1-204ENST00000586059 PVALEFA0A1B0GWK0 134 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 TISP43B9A030 160 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 C5orf67F2Z3F1 127 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 INPPL1O15357 1258 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 KLRC4O43908 158 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
CNN1-204ENST00000586059 CSPG5O95196 566 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 MYL1P05976 194 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 RB1P06400 928 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 YARSP54577 528 aaKnown RBP13.18□□□□□ -0.3
CNN1-204ENST00000586059 MCL1Q07820 350 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 EHHADHQ08426 723 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 KCNA1Q09470 495 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
CNN1-204ENST00000586059 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 KCNT2Q6UVM3 1135 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 KLHL23Q8NBE8 558 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 FAM193BQ96PV7 902 aaPredicted RBP13.18□□□□□ -0.3
CNN1-204ENST00000586059 HAPLN2Q9GZV7 340 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 IKZF4Q9H2S9 585 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 KANSL3Q9P2N6 904 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 BRWD1Q9NSI6 2320 aa13.18□□□□□ -0.3
CNN1-204ENST00000586059 ANKRD63C9JTQ0 380 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 H3BNC9 293 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNN1-204ENST00000586059 B4GALT3O60512 393 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 LPXNO60711 386 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
CNN1-204ENST00000586059 NR1I2O75469 434 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 RPN1P04843 607 aaKnown RBP13.17□□□□□ -0.3
CNN1-204ENST00000586059 BCAR1P56945 870 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 UBE2HP62256 183 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 GRIK3Q13003 919 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 POSTNQ15063 836 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 KMT5BQ4FZB7 885 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 MICALL1Q8N3F8 863 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 P2RX5Q93086 422 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 CCDC47Q96A33 483 aaKnown RBP13.17□□□□□ -0.3
CNN1-204ENST00000586059 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 SLC39A2Q9NP94 309 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
CNN1-204ENST00000586059 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 DNAJB4Q9UDY4 337 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
CNN1-204ENST00000586059 UBE4BO95155 1302 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 REV3LO60673 3130 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 NT5C1B-RDH14C9J2C7 533 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 PTGESO14684 152 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 OGTO15294 1046 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 GRM6O15303 877 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
CNN1-204ENST00000586059 FGF18O76093 207 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 DDHD2O94830 711 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 ITGB1P05556 798 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 PPM1AP35813 382 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 SLC11A1P49279 550 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
CNN1-204ENST00000586059 DPYDQ12882 1025 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 PNOCQ13519 176 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 GLRA4Q5JXX5 417 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 EPM2AIP1Q7L775 607 aaPredicted RBP13.16□□□□□ -0.3
CNN1-204ENST00000586059 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 SNX27Q96L92 541 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 ACAP3Q96P50 834 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 CXCL16Q9H2A7 254 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 TMEM206Q9H813 350 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 ALG13Q9NP73 1137 aaKnown RBP13.16□□□□□ -0.3
CNN1-204ENST00000586059 SPG21Q9NZD8 308 aa13.16□□□□□ -0.3
CNN1-204ENST00000586059 A0A0B4J269 797 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 THP07101 528 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 CLTAP09496 248 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 CXCL8P10145 99 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 TNFSF9P41273 254 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 OR1G1P47890 313 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 DSC1Q08554 894 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 KYAT1Q16773 422 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 PTPROQ16827 1216 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 SLFN12LQ6IEE8 588 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 NELFCDQ8IXH7 590 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 SLC39A11Q8N1S5 342 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 SCFD1Q8WVM8 642 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 TMEM169Q96HH4 297 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 TMEM175Q9BSA9 504 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 LMAN2LQ9H0V9 348 aa13.15□□□□□ -0.3
CNN1-204ENST00000586059 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms