RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 EDN1P05305 212 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 THP07101 528 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 GALTP07902 379 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 PFKFB1P16118 471 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 SYKP43405 635 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 SNRPFP62306 86 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 TUSC3Q13454 348 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 EEF1DP3Q658K8 133 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 KANK3Q6NY19 840 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 CD302Q8IX05 232 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 CCDC47Q96A33 483 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 ACAP3Q96P50 834 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 ACCSQ96QU6 501 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 COLEC11Q9BWP8 271 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 APOL6Q9BWW8 343 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 POLD4Q9HCU8 107 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 SNTG2Q9NY99 539 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 FAN1Q9Y2M0 1017 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 HES2Q9Y543 173 aa15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 PRRC2BQ5JSZ5 2229 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-202ENST00000585540 CITO14578 2027 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 LAMA2P24043 3122 aaKnown RBP15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 MEIS3P2A8K0S8 358 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 GRM6O15303 877 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 XPOTO43592 962 aaKnown RBP15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 LDHAP00338 332 aaKnown RBP15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 SCNN1GP51170 649 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 ASIC1P78348 528 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 ELAVL2Q12926 359 aaKnown RBP15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 COASYQ13057 564 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 XKR4Q5GH76 650 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 L1TD1Q5T7N2 865 aaKnown RBP15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 DDX53Q86TM3 631 aaKnown RBP15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 CDR2LQ86X02 465 aaPredicted RBP15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 COLGALT2Q8IYK4 626 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 IGSF21Q96ID5 467 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 STRA6Q9BX79 667 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 THEGQ9P2T0 379 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 IRAK3Q9Y616 596 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 STYXL1Q9Y6J8 313 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 PLXNA4Q9HCM2 1894 aa15.1■□□□□ 0.01
PRKCSH-202ENST00000585540 TTLL13PA6NNM8 815 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 FSCN2O14926 492 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 OGTO15294 1046 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 ACTN4O43707 911 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 GCNT3O95395 438 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 POMCP01189 267 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 CLTAP09496 248 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 SRGAP2BP0DMP2 458 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 AKAP5P24588 427 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 MATR3P43243 847 aaKnown RBP eCLIP15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 PSMD2Q13200 908 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 SMC1AQ14683 1233 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 COL19A1Q14993 1142 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 GSTCDQ8NEC7 633 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 ATXN2LQ8WWM7 1075 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 DDX27Q96GQ7 796 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 SNX27Q96L92 541 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 ALG13Q9NP73 1137 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 CNTN3Q9P232 1028 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 CGNQ9P2M7 1197 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 ANKFY1Q9P2R3 1169 aa15.09■□□□□ 0.01
PRKCSH-202ENST00000585540 A0A1B0GVL5 298 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 TMEM189-UBE2V1I3L0A0 370 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 NRP1O14786 923 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 KIF20AO95235 890 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 C1RP00736 705 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 KCNE1P15382 129 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 GARTP22102 1010 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 PAX3P23760 479 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 NMT1P30419 496 aaKnown RBP15.08■□□□□ 0
PRKCSH-202ENST00000585540 SLC11A1P49279 550 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 CREMQ03060 361 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 LONRF3Q496Y0 759 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 FAM26FQ5R3K3 315 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 MICALL1Q8N3F8 863 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 PABPC5Q96DU9 382 aaKnown RBP15.08■□□□□ 0
PRKCSH-202ENST00000585540 ZFP42Q96MM3 310 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 HERC2P3Q9BVR0 1158 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 GTPBP4Q9BZE4 634 aaKnown RBP15.08■□□□□ 0
PRKCSH-202ENST00000585540 GBP3Q9H0R5 595 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 GOLPH3LQ9H4A5 285 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 ENTPD7Q9NQZ7 604 aa15.08■□□□□ 0
PRKCSH-202ENST00000585540 A0A0B4J269 797 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 DDHD2O94830 711 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 CTSAP10619 480 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 OR1G1P47890 313 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 PPP2R3AQ06190 1150 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 EHHADHQ08426 723 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 SKIV2LQ15477 1246 aaKnown RBP15.07■□□□□ 0
PRKCSH-202ENST00000585540 PUS10Q3MIT2 529 aaKnown RBP15.07■□□□□ 0
PRKCSH-202ENST00000585540 PDXDC1Q6P996 788 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 ALKAL1Q6UXT8 129 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 NT5DC4Q86YG4 428 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 ZNF280BQ86YH2 543 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 FSIP1Q8NA03 581 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 HLA-CQ95604 372 aa15.07■□□□□ 0
PRKCSH-202ENST00000585540 PPP1R10Q96QC0 940 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms