RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CLSTN3Q9BQT9 956 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 PAAF1Q9BRP4 392 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 POLR3FQ9H1D9 316 aaPredicted RBP16.04■□□□□ 0.16
SDF2-202ENST00000585428 PIDD1Q9HB75 910 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 DLGAP2Q9P1A6 1054 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 PARP2Q9UGN5 583 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 TTLL13PA6NNM8 815 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 CREMQ03060 361 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 TUSC3Q13454 348 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 HTR4Q13639 388 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 HSP90AA2PQ14568 343 aaPredicted RBP16.03■□□□□ 0.16
SDF2-202ENST00000585428 ANKRD1Q15327 319 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 NAB2Q15742 525 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 ME3Q16798 604 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 RTP2Q5QGT7 225 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 PRSS55Q6UWB4 352 aaPredicted RBP16.03■□□□□ 0.16
SDF2-202ENST00000585428 CATSPER3Q86XQ3 398 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 GLYCTKQ8IVS8 523 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 NECAB1Q8N987 351 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 LNX1Q8TBB1 728 aaPredicted RBP16.03■□□□□ 0.16
SDF2-202ENST00000585428 GPR152Q8TDT2 470 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 SEMA4AQ9H3S1 761 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 BRMS1Q9HCU9 246 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 GPRC5CQ9NQ84 441 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 SLC2A4RGQ9NR83 387 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 PRMT7Q9NVM4 692 aaPredicted RBP16.03■□□□□ 0.16
SDF2-202ENST00000585428 CACNG4Q9UBN1 327 aa16.03■□□□□ 0.16
SDF2-202ENST00000585428 ZFP37Q9Y6Q3 630 aaPredicted RBP16.03■□□□□ 0.16
SDF2-202ENST00000585428 PTPRZ1P23471 2315 aaPredicted RBP16.02■□□□□ 0.16
SDF2-202ENST00000585428 PTGESO14684 152 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 NEMFO60524 1076 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 ANAPC15P60006 121 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 CDCA2Q69YH5 1023 aaPredicted RBP16.02■□□□□ 0.16
SDF2-202ENST00000585428 TTPALQ9BTX7 342 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 RPP25Q9BUL9 199 aaKnown RBP16.02■□□□□ 0.16
SDF2-202ENST00000585428 CXCL16Q9H2A7 254 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 TMEM60Q9H2L4 133 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 TBC1D17Q9HA65 648 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 CA14Q9ULX7 337 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 SIT1Q9Y3P8 196 aa16.02■□□□□ 0.16
SDF2-202ENST00000585428 DCHS1Q96JQ0 3298 aa16.02■□□□□ 0.15
SDF2-202ENST00000585428 SF3B1O75533 1304 aaKnown RBP eCLIP16.01■□□□□ 0.15
SDF2-202ENST00000585428 LRRIQ4A6NIV6 560 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 USO1O60763 962 aaKnown RBP16.01■□□□□ 0.15
SDF2-202ENST00000585428 THP07101 528 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 MAEAQ7L5Y9 396 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 GRASPQ7Z6J2 395 aaPredicted RBP16.01■□□□□ 0.15
SDF2-202ENST00000585428 NSUN7Q8NE18 718 aaKnown RBP16.01■□□□□ 0.15
SDF2-202ENST00000585428 PIK3R5Q8WYR1 880 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 PDZD7Q9H5P4 517 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 TUFT1Q9NNX1 390 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 FBXW11Q9UKB1 542 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 NUMBLQ9Y6R0 609 aa16.01■□□□□ 0.15
SDF2-202ENST00000585428 C2orf16Q68DN1 1984 aa16■□□□□ 0.15
SDF2-202ENST00000585428 POTEMA6NI47 508 aa16■□□□□ 0.15
SDF2-202ENST00000585428 MED24O75448 989 aa16■□□□□ 0.15
SDF2-202ENST00000585428 LARGE1O95461 756 aa16■□□□□ 0.15
SDF2-202ENST00000585428 HNRNPA1P09651 372 aaKnown RBP eCLIP16■□□□□ 0.15
SDF2-202ENST00000585428 ATP2B1P20020 1258 aa16■□□□□ 0.15
SDF2-202ENST00000585428 FSHRP23945 695 aa16■□□□□ 0.15
SDF2-202ENST00000585428 STARD6P59095 220 aa16■□□□□ 0.15
SDF2-202ENST00000585428 FAM171A1Q5VUB5 890 aa16■□□□□ 0.15
SDF2-202ENST00000585428 PARM1Q6UWI2 310 aa16■□□□□ 0.15
SDF2-202ENST00000585428 DIS3L2Q8IYB7 885 aaKnown RBP16■□□□□ 0.15
SDF2-202ENST00000585428 MCPH1Q8NEM0 835 aa16■□□□□ 0.15
SDF2-202ENST00000585428 ST13P5Q8NFI4 369 aaPredicted RBP16■□□□□ 0.15
SDF2-202ENST00000585428 GTF3C6Q969F1 213 aa16■□□□□ 0.15
SDF2-202ENST00000585428 NACC1Q96RE7 527 aa16■□□□□ 0.15
SDF2-202ENST00000585428 POLR3CQ9BUI4 534 aaPredicted RBP16■□□□□ 0.15
SDF2-202ENST00000585428 SNTG2Q9NY99 539 aa16■□□□□ 0.15
SDF2-202ENST00000585428 CASTOR2A6NHX0 329 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 ACKR2O00590 384 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 N4BP3O15049 544 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 ADAM12O43184 909 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 KIF4AO95239 1232 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 LMNAP02545 664 aaKnown RBP15.99■□□□□ 0.15
SDF2-202ENST00000585428 DCNP07585 359 aaKnown RBP15.99■□□□□ 0.15
SDF2-202ENST00000585428 GLULP15104 373 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 CYP11B2P19099 503 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 IGFBP6P24592 240 aaPredicted RBP15.99■□□□□ 0.15
SDF2-202ENST00000585428 HOXA9P31269 272 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 GPC5P78333 572 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 NTHL1P78549 312 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 UVSSAQ2YD98 709 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 DCLRE1AQ6PJP8 1040 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 GET4Q7L5D6 327 aaPredicted RBP15.99■□□□□ 0.15
SDF2-202ENST00000585428 ERMP1Q7Z2K6 904 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 CEP57Q86XR8 500 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 C1orf210Q8IVY1 113 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 HASPINQ8TF76 798 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 BSNDQ8WZ55 320 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 FGF14Q92915 247 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 CCDC43Q96MW1 224 aaKnown RBP15.99■□□□□ 0.15
SDF2-202ENST00000585428 CCDC113Q9H0I3 377 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 C2orf40Q9H1Z8 148 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 ARHGEF3Q9NR81 526 aa15.99■□□□□ 0.15
SDF2-202ENST00000585428 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
SDF2-202ENST00000585428 CDH7Q9ULB5 785 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms