RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RPF1Q9H9Y2 349 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-209ENST00000585335 HSPBP1Q9NZL4 362 aa15.9■□□□□ 0.14
SCAMP4-209ENST00000585335 TRAF3IP3Q9Y228 551 aa15.9■□□□□ 0.14
SCAMP4-209ENST00000585335 INPP5FQ9Y2H2 1132 aa15.9■□□□□ 0.14
SCAMP4-209ENST00000585335 RBAK-RBAKDNI3L0D1 243 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 CLIC2O15247 247 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 EXTL3O43909 919 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 ADSSP30520 456 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 MLH1P40692 756 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 HTRA4P83105 476 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 POU5F1Q01860 360 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 RNASELQ05823 741 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 LRRC63Q05C16 580 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 PAK1Q13153 545 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 BTG3Q14201 252 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 MYBPC2Q14324 1141 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 EDRF1Q3B7T1 1238 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 NOMO2Q5JPE7 1267 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 KLHL10Q6JEL2 608 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 TMCO2Q7Z6W1 182 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 LRRC43Q8N309 656 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 GPD1LQ8N335 351 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 XXYLT1Q8NBI6 393 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 P2RX5Q93086 422 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 CBWD1Q9BRT8 395 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 FAM213AQ9BRX8 229 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 IKZF4Q9H2S9 585 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 PCIF1Q9H4Z3 704 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 PLEKHA5Q9HAU0 1116 aa15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-209ENST00000585335 CARNS1A5YM72 827 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 ARL5CA6NH57 179 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 EXOC3O60645 756 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 NR3C1P04150 777 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CCNE1P24864 410 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 PPP2R3AQ06190 1150 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 STX1AQ16623 288 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 NFIL3Q16649 462 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 LRIT3Q3SXY7 679 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 PAN2Q504Q3 1202 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CT47A1Q5JQC4 288 aaPredicted RBP15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CLLU1OSQ5K130 101 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CENPPQ6IPU0 288 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 SLC9A9Q8IVB4 645 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CD302Q8IX05 232 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CEP120Q8N960 986 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 NELFBQ8WX92 580 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 SAAL1Q96ER3 474 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 FAM193BQ96PV7 902 aaPredicted RBP15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 GAD1Q99259 594 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 HAPLN2Q9GZV7 340 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 KLK14Q9P0G3 267 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CPSF3Q9UKF6 684 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 CTNND2Q9UQB3 1225 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 FRMD4BQ9Y2L6 1034 aa15.88■□□□□ 0.13
SCAMP4-209ENST00000585335 ZNF233A6NK53 670 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 MEIS3P2A8K0S8 358 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 GRXCR1A8MXD5 290 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 PPP1R3GB7ZBB8 358 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 CETN3O15182 167 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 OFD1O75665 1012 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 IL18RAPO95256 599 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 BMP6P22004 513 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 NR2F2P24468 414 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 ACOT2P49753 483 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 RABGGTBP53611 331 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 GRIK3Q13003 919 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 SEZ6Q53EL9 994 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 SPOUT1Q5T280 376 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 FAM109BQ6ICB4 259 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 FIBCD1Q8N539 461 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 TMEM174Q8WUU8 243 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 ZNF689Q96CS4 500 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 SNX27Q96L92 541 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 TSPAN18Q96SJ8 248 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 AAASQ9NRG9 546 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 RNF19AQ9NV58 838 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 SLC38A7Q9NVC3 462 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 RBAKQ9NYW8 714 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 RWDD3Q9Y3V2 267 aa15.87■□□□□ 0.13
SCAMP4-209ENST00000585335 PTPRSQ13332 1948 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 GOLGA8IPA6NC78 632 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 GOLGA8JA6NMD2 632 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 TULP1O00294 542 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 INPPL1O15357 1258 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 XPOTO43592 962 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 FAM189A1O60320 539 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 FGFR1OPO95684 399 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 CCDC192P0DO97 292 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 CXCL8P10145 99 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 TNFSF9P41273 254 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 GATMP50440 423 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 SCNN1GP51170 649 aa15.86■□□□□ 0.13
SCAMP4-209ENST00000585335 FKBP3Q00688 224 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms